RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 LMX1AQ8TE12 382 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 PATE1Q8WXA2 126 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 JPH3Q8WXH2 748 aaPredicted RBP11.03□□□□□ -0.64
PRKCB-207ENST00000486868 NCLNQ969V3 563 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 RERGQ96A58 199 aaPredicted RBP11.03□□□□□ -0.64
PRKCB-207ENST00000486868 CIDECQ96AQ7 238 aaPredicted RBP11.03□□□□□ -0.64
PRKCB-207ENST00000486868 SLC47A1Q96FL8 570 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 RDH12Q96NR8 316 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 COQ10BQ9H8M1 238 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 PRMT8Q9NR22 394 aaPredicted RBP11.03□□□□□ -0.64
PRKCB-207ENST00000486868 GIMAP4Q9NUV9 329 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 GPATCH2Q9NW75 528 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 TEX10Q9NXF1 929 aaPredicted RBP11.03□□□□□ -0.64
PRKCB-207ENST00000486868 SPTBN5Q9NRC6 3674 aaKnown RBP11.03□□□□□ -0.64
PRKCB-207ENST00000486868 PLXND1Q9Y4D7 1925 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 SZT2Q5T011 3432 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 A0A1W2PR48 441 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 MAGEA13PA6NCF6 341 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 B4DGG1 531 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 ACOX3O15254 700 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 PIAS2O75928 621 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 PRKD3O94806 890 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 UBXN7O94888 489 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 SLITRK5O94991 958 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 RASAL1O95294 804 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 SERPINA1P01009 418 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 SEMG1P04279 462 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 ALOX12P18054 663 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 CSNK2A2P19784 350 aaPredicted RBP11.02□□□□□ -0.65
PRKCB-207ENST00000486868 BCKDHBP21953 392 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 TLX1P31314 330 aaPredicted RBP11.02□□□□□ -0.65
PRKCB-207ENST00000486868 CHI3L1P36222 383 aaPredicted RBP11.02□□□□□ -0.65
PRKCB-207ENST00000486868 BUD31P41223 144 aaPredicted RBP11.02□□□□□ -0.65
PRKCB-207ENST00000486868 CAPZBP47756 277 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 PXNP49023 591 aaPredicted RBP11.02□□□□□ -0.65
PRKCB-207ENST00000486868 SKP1P63208 163 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 MRPS35P82673 323 aaKnown RBP11.02□□□□□ -0.65
PRKCB-207ENST00000486868 FOLH1Q04609 750 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 SIGLEC14Q08ET2 396 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 LRRC36Q1X8D7 754 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 C14orf28Q4W4Y0 310 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 CRB2Q5IJ48 1285 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 TMEM214Q6NUQ4 689 aaKnown RBP11.02□□□□□ -0.65
PRKCB-207ENST00000486868 AMER3Q8N944 861 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 OR8K5Q8NH50 307 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 MIPOL1Q8TD10 442 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 GATA6Q92908 595 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 AMDHD1Q96NU7 426 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 TRAPPC9Q96Q05 1148 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 SEPHS2Q99611 448 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 CXorf36Q9H7Y0 433 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 A4GALTQ9NPC4 353 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 IL1RAPQ9NPH3 570 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 PRDM6Q9NQX0 595 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 SEMA3GQ9NS98 782 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 SIRT3Q9NTG7 399 aaPredicted RBP11.02□□□□□ -0.65
PRKCB-207ENST00000486868 ADPRHL2Q9NX46 363 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 SUSD2Q9UGT4 822 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 UTS2RQ9UKP6 389 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 ATG4BQ9Y4P1 393 aa11.02□□□□□ -0.65
PRKCB-207ENST00000486868 A0A0J9YVX5 310 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 RNF103-CHMP3A0A140T963 221 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 A0A1B0GTW7 788 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 BLACEA4D250 179 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 C4orf51C9J302 202 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 H0YGG7 62 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 UPK1AO00322 258 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 PPM1DO15297 605 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 B3GALT2O43825 422 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 AIFM1O95831 613 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 HPRP00739 348 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 PROS1P07225 676 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 DCNP07585 359 aaKnown RBP11.01□□□□□ -0.65
PRKCB-207ENST00000486868 RPSAP08865 295 aaKnown RBP11.01□□□□□ -0.65
PRKCB-207ENST00000486868 NR2F6P10588 404 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 TDGF1P13385 188 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 HOXB3P14651 431 aaPredicted RBP11.01□□□□□ -0.65
PRKCB-207ENST00000486868 GNSP15586 552 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 MAOBP27338 520 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 MPIP34949 423 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 CRATP43155 626 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 CTSKP43235 329 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 LSSP48449 732 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 ALDH9A1P49189 494 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 PRIM2P49643 509 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 EMP3P54852 163 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 ARF3P61204 181 aaPredicted RBP11.01□□□□□ -0.65
PRKCB-207ENST00000486868 BTN3A2P78410 334 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 TNFRSF17Q02223 184 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 GK3PQ14409 553 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 NR1D2Q14995 579 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.01□□□□□ -0.65
PRKCB-207ENST00000486868 PRAMEF8Q5VWM4 474 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 PRAMEF7Q5VXH5 474 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 ZNF438Q7Z4V0 828 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 PATL1Q86TB9 770 aaKnown RBP11.01□□□□□ -0.65
PRKCB-207ENST00000486868 TRIM73Q86UV7 250 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 MMP21Q8N119 569 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 KCT2Q8NC54 265 aa11.01□□□□□ -0.65
PRKCB-207ENST00000486868 OR56A1Q8NGH5 318 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms