RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 CYR61O00622 381 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 MAN1A2O60476 641 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 SEMA7AO75326 666 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 SCELO95171 688 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 MLYCDO95822 493 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 COX7A2P14406 83 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 TAC1P20366 129 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 TPP2P29144 1249 aaPredicted RBP12.04□□□□□ -0.48
CHMP3-208ENST00000486404 PPP2R1BP30154 601 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 TLX1P31314 330 aaPredicted RBP12.04□□□□□ -0.48
CHMP3-208ENST00000486404 BUD31P41223 144 aaPredicted RBP12.04□□□□□ -0.48
CHMP3-208ENST00000486404 CYB561P49447 251 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 ST13P50502 369 aaKnown RBP12.04□□□□□ -0.48
CHMP3-208ENST00000486404 PMP22Q01453 160 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 TNFRSF17Q02223 184 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 SRSF1Q07955 248 aaKnown RBP eCLIP12.04□□□□□ -0.48
CHMP3-208ENST00000486404 IFT88Q13099 833 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 SERTAD2Q14140 314 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 ZRSR2Q15696 482 aaKnown RBP12.04□□□□□ -0.48
CHMP3-208ENST00000486404 OR4C11Q6IEV9 310 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 CYP20A1Q6UW02 462 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 UBE3DQ7Z6J8 389 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 NUDT13Q86X67 352 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 CNPY4Q8N129 248 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 TMEM132CQ8N3T6 1108 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 RNF175Q8N4F7 328 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 OR14A16Q8NHC5 309 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 THAP3Q8WTV1 239 aaPredicted RBP12.04□□□□□ -0.48
CHMP3-208ENST00000486404 NR4A3Q92570 626 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 DAZLQ92904 295 aaKnown RBP12.04□□□□□ -0.48
CHMP3-208ENST00000486404 NCLNQ969V3 563 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 TMEM125Q96AQ2 219 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 CDK15Q96Q40 435 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 NPAS2Q99743 824 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 SORBS1Q9BX66 1292 aaKnown RBP12.04□□□□□ -0.48
CHMP3-208ENST00000486404 SEMA4BQ9NPR2 832 aaPredicted RBP12.04□□□□□ -0.48
CHMP3-208ENST00000486404 LYARQ9NX58 379 aaKnown RBP12.04□□□□□ -0.48
CHMP3-208ENST00000486404 MS4A12Q9NXJ0 267 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 LRFN1Q9P244 771 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 COPS7AQ9UBW8 275 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 SLC5A6Q9Y289 635 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 RNF11Q9Y3C5 154 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 TSC22D4Q9Y3Q8 395 aa12.04□□□□□ -0.48
CHMP3-208ENST00000486404 TGFBR3LH3BV60 316 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 PLPP1O14494 284 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 DYRK3O43781 588 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 CTNSO60931 367 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 LDB3O75112 727 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 SLC25A12O75746 678 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 OTCP00480 354 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 FAM153BP0C7A2 387 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 TNNI3P19429 210 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 PTX3P26022 381 aaPredicted RBP12.03□□□□□ -0.48
CHMP3-208ENST00000486404 CD96P40200 585 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 PER3P56645 1201 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 MLF1P58340 268 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 PLIN5Q00G26 463 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 ID2Q02363 134 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 SLAMF1Q13291 335 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 FAM153CQ494X1 144 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 C10orf62Q5T681 223 aaPredicted RBP12.03□□□□□ -0.48
CHMP3-208ENST00000486404 DEPDC1Q5TB30 811 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 GFRALQ6UXV0 394 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 GPR180Q86V85 440 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 LCA5Q86VQ0 697 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 TMEM156Q8N614 296 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 L3MBTL4Q8NA19 623 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 APCDD1LQ8NCL9 501 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 LRRN4CLQ8ND94 238 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 MDS2Q8NDY4 140 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 C7orf57Q8NEG2 295 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 NFAM1Q8NET5 270 aaPredicted RBP12.03□□□□□ -0.48
CHMP3-208ENST00000486404 OR52B6Q8NGF0 335 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 DNAJB8Q8NHS0 232 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 UBLCP1Q8WVY7 318 aaPredicted RBP12.03□□□□□ -0.48
CHMP3-208ENST00000486404 SIGLEC12Q96PQ1 595 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 TAAR6Q96RI8 345 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 SERPINI1Q99574 410 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 ALOXE3Q9BYJ1 711 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 OR8D2Q9GZM6 311 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 ELOVL6Q9H5J4 265 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 WDR41Q9HAD4 459 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 RYDENQ9NUL5 291 aaKnown RBP12.03□□□□□ -0.48
CHMP3-208ENST00000486404 OSGIN2Q9Y236 505 aa12.03□□□□□ -0.48
CHMP3-208ENST00000486404 USP9YO00507 2555 aaPredicted RBP12.03□□□□□ -0.48
CHMP3-208ENST00000486404 COL12A1Q99715 3063 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 MYOCOSA0A1B0GUC4 107 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 ARHGAP10A1A4S6 786 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 A8MT66 165 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 C17orf105B2RV13 164 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 CDK2AP1O14519 115 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 OR7A17O14581 309 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 DDAH2O95865 285 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 RPS17P08708 135 aaKnown RBP12.02□□□□□ -0.49
CHMP3-208ENST00000486404 NR2F6P10588 404 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 ARFIP1P53367 373 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 RBPJQ06330 500 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 TRAF3Q13114 568 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 CUL3Q13618 768 aa12.02□□□□□ -0.49
CHMP3-208ENST00000486404 SLC29A2Q14542 456 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms