RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 FAR2Q96K12 515 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 IP6K3Q96PC2 410 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 CSF3RQ99062 836 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 HBEGFQ99075 208 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 TBCDQ9BTW9 1192 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 ELOVL6Q9H5J4 265 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 MID1IP1Q9NPA3 183 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 KCMF1Q9P0J7 381 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 FBXL4Q9UKA2 621 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 DAPP1Q9UN19 280 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 CLDN16Q9Y5I7 305 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 SHANK1Q9Y566 2161 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 RP1L1Q8IWN7 2480 aaPredicted RBP12.13□□□□□ -0.47
SSR4-211ENST00000486204 EXPH5Q8NEV8 1989 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 A0A088AWK7 358 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 FAM227AF5H4B4 570 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 MANBAO00462 879 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 B3GALT2O43825 422 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 ALOX12BO75342 701 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 CDC123O75794 336 aaPredicted RBP12.13□□□□□ -0.47
SSR4-211ENST00000486204 SEMA3DO95025 777 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 HEXBP07686 556 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 BPGMP07738 259 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 FHP07954 510 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 MYZAPP0CAP1 466 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 COX6A1P12074 109 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 ZNF10P21506 573 aaPredicted RBP12.13□□□□□ -0.47
SSR4-211ENST00000486204 PTX3P26022 381 aaPredicted RBP12.13□□□□□ -0.47
SSR4-211ENST00000486204 ARRB2P32121 409 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 BSGP35613 385 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 HNRNPFP52597 415 aaKnown RBP12.13□□□□□ -0.47
SSR4-211ENST00000486204 LIM2P55344 173 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 RAB38P57729 211 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 TGM3Q08188 693 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 IFT88Q13099 833 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 TUBB8Q3ZCM7 444 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 MINDY4Q4G0A6 757 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 DCAF10Q5QP82 559 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 CES4AQ5XG92 561 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 TTC19Q6DKK2 380 aaPredicted RBP12.13□□□□□ -0.47
SSR4-211ENST00000486204 OR4C11Q6IEV9 310 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 LANCL3Q6ZV70 420 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 TMEM102Q8N9M5 508 aaPredicted RBP12.13□□□□□ -0.47
SSR4-211ENST00000486204 SRFBP1Q8NEF9 429 aaKnown RBP12.13□□□□□ -0.47
SSR4-211ENST00000486204 SELENOMQ8WWX9 145 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 RGMAQ96B86 450 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 C8orf44Q96CB5 159 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 SERPINI1Q99574 410 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 SLC25A23Q9BV35 468 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 ROGDIQ9GZN7 287 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 DDX31Q9H8H2 851 aaKnown RBP12.13□□□□□ -0.47
SSR4-211ENST00000486204 COPS7BQ9H9Q2 264 aaPredicted RBP12.13□□□□□ -0.47
SSR4-211ENST00000486204 BRF2Q9HAW0 419 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 SLAMF7Q9NQ25 335 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 SNX6Q9UNH7 406 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 ENTPD4Q9Y227 616 aa12.13□□□□□ -0.47
SSR4-211ENST00000486204 F8P00451 2351 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 IGKV3D-11A0A0A0MRZ8 115 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 IGHV1-45A0A0A0MS14 117 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 A0A0A6YYD5 115 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 H3BQF6 201 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 TGFBR3LH3BV60 316 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 CYR61O00622 381 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 PCDH17O14917 1159 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 TM9SF1O15321 606 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 NPHS1O60500 1241 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 EEDO75530 441 aaKnown RBP12.12□□□□□ -0.47
SSR4-211ENST00000486204 CEACAM4O75871 244 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 CHRNGP07510 517 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 C8orf89P0DMQ9 161 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 ACPPP15309 386 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 SSR2P43308 183 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 SERPINB4P48594 390 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 RAP1GDS1P52306 607 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 BTG2P78543 158 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 TBL3Q12788 808 aaKnown RBP12.12□□□□□ -0.47
SSR4-211ENST00000486204 CSTF3Q12996 717 aaKnown RBP12.12□□□□□ -0.47
SSR4-211ENST00000486204 PCOLCEQ15113 449 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 NR6A1Q15406 480 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 SGO1Q5FBB7 561 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 CFAP157Q5JU67 520 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 FAAH2Q6GMR7 532 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 QSOX2Q6ZRP7 698 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 ZCCHC23Q6ZST2 131 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 MCEMP1Q8IX19 187 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 ZCCHC7Q8N3Z6 543 aaKnown RBP12.12□□□□□ -0.47
SSR4-211ENST00000486204 AMER2Q8N7J2 671 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 PLPP5Q8NEB5 264 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 METTL6Q8TCB7 284 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 TSLPQ969D9 159 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 PKNOX2Q96KN3 472 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 MAPKAP1Q9BPZ7 522 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 WDR77Q9BQA1 342 aaPredicted RBP12.12□□□□□ -0.47
SSR4-211ENST00000486204 TRMOQ9BU70 441 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 MRPL1Q9BYD6 325 aaKnown RBP12.12□□□□□ -0.47
SSR4-211ENST00000486204 ING2Q9H160 280 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 LYRM4Q9HD34 91 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 ARGLU1Q9NWB6 273 aaPredicted RBP12.12□□□□□ -0.47
SSR4-211ENST00000486204 LUZP4Q9P127 313 aa12.12□□□□□ -0.47
SSR4-211ENST00000486204 TIMM22Q9Y584 194 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms