RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 PRTFDC1Q9NRG1 225 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 C19orf25Q9UFG5 118 aaPredicted RBP10.74□□□□□ -0.69
NUP50-216ENST00000486184 ZMIZ1Q9ULJ6 1067 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 TMED5Q9Y3A6 229 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 POLR3HQ9Y535 204 aaPredicted RBP10.74□□□□□ -0.69
NUP50-216ENST00000486184 APC2O95996 2303 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 URB1O60287 2271 aaKnown RBP10.73□□□□□ -0.69
NUP50-216ENST00000486184 IGF2RP11717 2491 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 A0A087WV48 116 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 TCP11X1B4DZS4 312 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 TAF4O00268 1085 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 PEX12O00623 359 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 PCDH17O14917 1159 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 LSM1O15116 133 aaKnown RBP10.73□□□□□ -0.69
NUP50-216ENST00000486184 EFSO43281 561 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 TMPRSS11DO60235 418 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 PRMT3O60678 531 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 CNOT3O75175 753 aaKnown RBP10.73□□□□□ -0.69
NUP50-216ENST00000486184 DNAJB6O75190 326 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 PEX11AO75192 247 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 KLF7O75840 302 aaPredicted RBP10.73□□□□□ -0.69
NUP50-216ENST00000486184 CYC1P08574 325 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 C8orf89P0DMQ9 161 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 PRKAR1AP10644 381 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 PPP2R1BP30154 601 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 MDH1P40925 334 aaKnown RBP10.73□□□□□ -0.69
NUP50-216ENST00000486184 HNRNPH2P55795 449 aaKnown RBP10.73□□□□□ -0.69
NUP50-216ENST00000486184 HSD17B7P56937 341 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 TLE3Q04726 772 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 ZNF763Q0D2J5 394 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 SRSF6Q13247 344 aaKnown RBP10.73□□□□□ -0.69
NUP50-216ENST00000486184 XKR7Q5GH72 579 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 FAAH2Q6GMR7 532 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 NOXRED1Q6NXP6 359 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 QSOX2Q6ZRP7 698 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 RGS9BPQ6ZS82 235 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 TMEM132CQ8N3T6 1108 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 FNDC5Q8NAU1 212 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 OR2T11Q8NH01 316 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 PTCHD1Q96NR3 888 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 CNTNAP3BQ96NU0 1288 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 IP6K3Q96PC2 410 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 HS3ST6Q96QI5 342 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 CSF3RQ99062 836 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 CNTNAP3Q9BZ76 1288 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 RPF2Q9H7B2 306 aaKnown RBP10.73□□□□□ -0.69
NUP50-216ENST00000486184 SLCO1B3Q9NPD5 702 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 PRDM9Q9NQV7 894 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 MMACHCQ9Y4U1 282 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 CHD8Q9HCK8 2581 aa10.73□□□□□ -0.69
NUP50-216ENST00000486184 SYNDIG1LA6NDD5 238 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 NPIPB8E9PQR5 432 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 FAM227AF5H4B4 570 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 PROM1O43490 865 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 ALOX12BO75342 701 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 RECKO95980 971 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 JUNP05412 331 aaKnown RBP10.72□□□□□ -0.69
NUP50-216ENST00000486184 VIMP08670 466 aaKnown RBP10.72□□□□□ -0.69
NUP50-216ENST00000486184 MMP11P24347 488 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 ITPKBP27987 946 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 ALDH9A1P49189 494 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 FOXL2P58012 376 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 TAS2R50P59544 299 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 CXADRP78310 365 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 VAC14Q08AM6 782 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 CDC20Q12834 499 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 STX4Q12846 297 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 IL10RAQ13651 578 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 HEPACAMQ14CZ8 416 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 NSDHLQ15738 373 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 UGT8Q16880 541 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 NDUFAF5Q5TEU4 345 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 FAM69BQ5VUD6 431 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 NXNQ6DKJ4 435 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 OR52E8Q6IFG1 317 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 MRM1Q6IN84 353 aaKnown RBP10.72□□□□□ -0.69
NUP50-216ENST00000486184 GALNT18Q6P9A2 607 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 Q6ZSR9 355 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 CLNKQ7Z7G1 428 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 LAPTM4BQ86VI4 370 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 PARP9Q8IXQ6 854 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 C7orf57Q8NEG2 295 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 TANKQ92844 425 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 NACC2Q96BF6 587 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 C3orf30Q96M34 536 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 C1orf50Q9BV19 199 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 VN1R1Q9GZP7 353 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 MEAF6Q9HAF1 191 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 LANCL2Q9NS86 450 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 SIRT5Q9NXA8 310 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 KCMF1Q9P0J7 381 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 EIF3LQ9Y262 564 aaKnown RBP10.72□□□□□ -0.69
NUP50-216ENST00000486184 ATG4BQ9Y4P1 393 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 CCL27Q9Y4X3 112 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 ASB4Q9Y574 426 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 USH1CQ9Y6N9 552 aa10.72□□□□□ -0.69
NUP50-216ENST00000486184 GOLGA8QA0A0J9YX86 632 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 C1orf226A1L170 272 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 GOLGA8OA6NCC3 632 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 GOLGA8NF8WBI6 632 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms