RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 SEC24DO94855 1032 aaPredicted RBP9.2□□□□□ -0.94
SND1-213ENST00000486037 FTH1P02794 183 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 SP1P08047 785 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 VIMP08670 466 aaKnown RBP9.2□□□□□ -0.94
SND1-213ENST00000486037 NEFHP12036 1026 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 CXCR2P25025 360 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 ARRB2P32121 409 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 RGS4P49798 205 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 SNRPNP63162 240 aaKnown RBP9.2□□□□□ -0.94
SND1-213ENST00000486037 NKX6-1P78426 367 aaPredicted RBP9.2□□□□□ -0.94
SND1-213ENST00000486037 KEAP1Q14145 624 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 SYT16Q17RD7 645 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 WASHC2DQ5SRD0 308 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 TMEM211Q6ICI0 200 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 CGB2Q6NT52 195 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 TMEM205Q6UW68 189 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 FAM47EQ6ZV65 393 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 ZNF227Q86WZ6 799 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 TRIM42Q8IWZ5 723 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 OR4N4Q8N0Y3 316 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 EID3Q8N140 333 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 TTC29Q8NA56 475 aaPredicted RBP9.2□□□□□ -0.94
SND1-213ENST00000486037 RHEBL1Q8TAI7 183 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 ELMO1Q92556 727 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 EXT2Q93063 718 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 CHMP6Q96FZ7 201 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 GATA5Q9BWX5 397 aaPredicted RBP9.2□□□□□ -0.94
SND1-213ENST00000486037 TSSK1BQ9BXA7 367 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 SYNPO2LQ9H987 977 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 FGFR1OP2Q9NVK5 253 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 TRPS1Q9UHF7 1281 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 ADAMTS6Q9UKP5 1117 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 ZNF407Q9C0G0 2248 aa9.2□□□□□ -0.94
SND1-213ENST00000486037 CHD3Q12873 2000 aaKnown RBP9.19□□□□□ -0.94
SND1-213ENST00000486037 MPDZO75970 2070 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 SLC5A10A0PJK1 596 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 HYKKA2RU49 373 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 KLHL33A6NCF5 533 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 F8W8V4 182 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 EIF3FO00303 357 aaPredicted RBP9.19□□□□□ -0.94
SND1-213ENST00000486037 ITM2AO43736 263 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 CDC40O60508 579 aaKnown RBP eCLIP9.19□□□□□ -0.94
SND1-213ENST00000486037 TRIM13O60858 407 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 EDF1O60869 148 aaKnown RBP9.19□□□□□ -0.94
SND1-213ENST00000486037 SNNO75324 88 aaPredicted RBP9.19□□□□□ -0.94
SND1-213ENST00000486037 LYPLA1O75608 230 aaPredicted RBP9.19□□□□□ -0.94
SND1-213ENST00000486037 SERPINE1P05121 402 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 HEXBP07686 556 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 MPC1LP0DKB6 136 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 ENO3P13929 434 aaPredicted RBP9.19□□□□□ -0.94
SND1-213ENST00000486037 MTHFD2P13995 350 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 CD53P19397 219 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 FBLP22087 321 aaKnown RBP9.19□□□□□ -0.94
SND1-213ENST00000486037 ATP5F1P24539 256 aaPredicted RBP9.19□□□□□ -0.94
SND1-213ENST00000486037 ACADLP28330 430 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 KIR2DL3P43628 341 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 PPP2R2BQ00005 443 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 HSPA14Q0VDF9 509 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 CMPK2Q5EBM0 449 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 YOD1Q5VVQ6 348 aaPredicted RBP9.19□□□□□ -0.94
SND1-213ENST00000486037 LIPMQ5VYY2 423 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 SLC25A25Q6KCM7 469 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 H3F3CQ6NXT2 135 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 FIGLAQ6QHK4 219 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 SBSNQ6UWP8 590 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 LANCL3Q6ZV70 420 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 CXorf67Q86X51 503 aaPredicted RBP9.19□□□□□ -0.94
SND1-213ENST00000486037 MYO1HQ8N1T3 1032 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 AMER3Q8N944 861 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 TMEM178AQ8NBL3 297 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 RAB3IL1Q8TBN0 382 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 STAG3L4Q8TBR4 150 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 IL17FQ96PD4 163 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 CCT8L2Q96SF2 557 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 UTP23Q9BRU9 249 aaKnown RBP9.19□□□□□ -0.94
SND1-213ENST00000486037 MENTQ9BUN1 341 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 C20orf27Q9GZN8 174 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 FAM107BQ9H098 131 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 PLEKHF2Q9H8W4 249 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 OR6C2Q9NZP2 312 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 RNF112Q9ULX5 631 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 ASF1AQ9Y294 204 aa9.19□□□□□ -0.94
SND1-213ENST00000486037 A0A0G2JNJ9 132 aa9.18□□□□□ -0.94
SND1-213ENST00000486037 A0A1W2PPR1 153 aa9.18□□□□□ -0.94
SND1-213ENST00000486037 CCDC189A1A4V9 331 aa9.18□□□□□ -0.94
SND1-213ENST00000486037 OR2W5A6NFC9 320 aa9.18□□□□□ -0.94
SND1-213ENST00000486037 TRIM64A6NGJ6 449 aa9.18□□□□□ -0.94
SND1-213ENST00000486037 TRIM64BA6NI03 449 aa9.18□□□□□ -0.94
SND1-213ENST00000486037 GABRR3A8MPY1 467 aa9.18□□□□□ -0.94
SND1-213ENST00000486037 SUPT3HB4E1H0 165 aa9.18□□□□□ -0.94
SND1-213ENST00000486037 KPNA5O15131 536 aa9.18□□□□□ -0.94
SND1-213ENST00000486037 HS6ST1O60243 411 aa9.18□□□□□ -0.94
SND1-213ENST00000486037 SMIM24O75264 130 aa9.18□□□□□ -0.94
SND1-213ENST00000486037 SUPT3HO75486 399 aa9.18□□□□□ -0.94
SND1-213ENST00000486037 PDE9AO76083 593 aa9.18□□□□□ -0.94
SND1-213ENST00000486037 CD46P15529 392 aa9.18□□□□□ -0.94
SND1-213ENST00000486037 PKLRP30613 574 aa9.18□□□□□ -0.94
SND1-213ENST00000486037 PRKAA2P54646 552 aa9.18□□□□□ -0.94
SND1-213ENST00000486037 DNAJB13P59910 316 aa9.18□□□□□ -0.94
SND1-213ENST00000486037 DCAF7P61962 342 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms