RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 DAPP1Q9UN19 280 aa11.53□□□□□ -0.56
TRA2B-213ENST00000485530 ATG4BQ9Y4P1 393 aa11.53□□□□□ -0.56
TRA2B-213ENST00000485530 CLDN16Q9Y5I7 305 aa11.53□□□□□ -0.56
TRA2B-213ENST00000485530 TEP1Q99973 2627 aaKnown RBP11.52□□□□□ -0.57
TRA2B-213ENST00000485530 A0A1W2PR48 441 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 C21orf140B9A014 251 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 NPIPB8E9PQR5 432 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 LSM1O15116 133 aaKnown RBP11.52□□□□□ -0.57
TRA2B-213ENST00000485530 PROM1O43490 865 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 B3GALT2O43825 422 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 PRKRAO75569 313 aaKnown RBP11.52□□□□□ -0.57
TRA2B-213ENST00000485530 PIM1P11309 404 aaPredicted RBP11.52□□□□□ -0.57
TRA2B-213ENST00000485530 SFTPCP11686 197 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 SSR2P43308 183 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 XCR1P46094 333 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 RAP1GDS1P52306 607 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 GYS2P54840 703 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 PHEXP78562 749 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 KLC1Q07866 573 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 XKR7Q5GH72 579 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 ATP1A1-AS1Q5TC04 95 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 C18orf63Q68DL7 685 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 RGS9BPQ6ZS82 235 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 MED25Q71SY5 747 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 TRIM42Q8IWZ5 723 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 MMP21Q8N119 569 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 ZCCHC7Q8N3Z6 543 aaKnown RBP11.52□□□□□ -0.57
TRA2B-213ENST00000485530 SRFBP1Q8NEF9 429 aaKnown RBP11.52□□□□□ -0.57
TRA2B-213ENST00000485530 TM4SF18Q96CE8 201 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 SLC45A3Q96JT2 553 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 PPP1R36Q96LQ0 422 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 MAGEB18Q96M61 343 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 CSF3RQ99062 836 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 NPLQ9BXD5 320 aaPredicted RBP11.52□□□□□ -0.57
TRA2B-213ENST00000485530 RBCK1Q9BYM8 510 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 WDR54Q9H977 334 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 CLK4Q9HAZ1 481 aaKnown RBP11.52□□□□□ -0.57
TRA2B-213ENST00000485530 MKKSQ9NPJ1 570 aaPredicted RBP11.52□□□□□ -0.57
TRA2B-213ENST00000485530 SIRT5Q9NXA8 310 aa11.52□□□□□ -0.57
TRA2B-213ENST00000485530 MARCOQ9UEW3 520 aaPredicted RBP11.52□□□□□ -0.57
TRA2B-213ENST00000485530 PTRH2Q9Y3E5 179 aaKnown RBP11.52□□□□□ -0.57
TRA2B-213ENST00000485530 PCSK5Q92824 1860 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 C9J4A7 227 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 TGFBR3LH3BV60 316 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 MASP2O00187 686 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 SLC28A1O00337 649 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 PGRMC2O15173 223 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 B4GALT2O60909 372 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 SKAP2O75563 359 aaPredicted RBP11.51□□□□□ -0.57
TRA2B-213ENST00000485530 CREG1O75629 220 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 CDC123O75794 336 aaPredicted RBP11.51□□□□□ -0.57
TRA2B-213ENST00000485530 FAM58BPP0C7Q3 252 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 KITP10721 976 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 PRPH2P23942 346 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 TACR1P25103 407 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 TSFMP43897 325 aaKnown RBP11.51□□□□□ -0.57
TRA2B-213ENST00000485530 RPS15P62841 145 aaKnown RBP11.51□□□□□ -0.57
TRA2B-213ENST00000485530 RHAGQ02094 409 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 TGM3Q08188 693 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 IL10RAQ13651 578 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 PDCD2Q16342 344 aaPredicted RBP11.51□□□□□ -0.57
TRA2B-213ENST00000485530 PRSS53Q2L4Q9 553 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 SPDYAQ5MJ70 313 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 VWA5B1Q5TIE3 1220 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 GALNT18Q6P9A2 607 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 DDIASQ8IXT1 998 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 OR2Y1Q8NGV0 311 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.51□□□□□ -0.57
TRA2B-213ENST00000485530 LRRC8CQ8TDW0 803 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 ADAMTS17Q8TE56 1095 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 DYDC1Q8WWB3 177 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 TBC1D20Q96BZ9 403 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 MIEF2Q96C03 454 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 C7orf26Q96N11 449 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 NUF2Q9BZD4 464 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 VN1R1Q9GZP7 353 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 SLC25A18Q9H1K4 315 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 EPN3Q9H201 632 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 LYRM4Q9HD34 91 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 PRM3Q9NNZ6 103 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 TEX10Q9NXF1 929 aaPredicted RBP11.51□□□□□ -0.57
TRA2B-213ENST00000485530 GPN3Q9UHW5 284 aaPredicted RBP11.51□□□□□ -0.57
TRA2B-213ENST00000485530 ADAM29Q9UKF5 820 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 FBXW2Q9UKT8 454 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 EXO1Q9UQ84 846 aaKnown RBP11.51□□□□□ -0.57
TRA2B-213ENST00000485530 MAN2B2Q9Y2E5 1009 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 DLGAP4Q9Y2H0 992 aa11.51□□□□□ -0.57
TRA2B-213ENST00000485530 CCDC88CQ9P219 2028 aa11.5□□□□□ -0.57
TRA2B-213ENST00000485530 MYOCOSA0A1B0GUC4 107 aa11.5□□□□□ -0.57
TRA2B-213ENST00000485530 ARHGAP10A1A4S6 786 aa11.5□□□□□ -0.57
TRA2B-213ENST00000485530 IDSB3KWA1 339 aa11.5□□□□□ -0.57
TRA2B-213ENST00000485530 TCP11X1B4DZS4 312 aa11.5□□□□□ -0.57
TRA2B-213ENST00000485530 PEX11AO75192 247 aa11.5□□□□□ -0.57
TRA2B-213ENST00000485530 SEC22BO75396 215 aa11.5□□□□□ -0.57
TRA2B-213ENST00000485530 RSL1D1O76021 490 aaKnown RBP11.5□□□□□ -0.57
TRA2B-213ENST00000485530 SNUPNO95149 360 aaKnown RBP11.5□□□□□ -0.57
TRA2B-213ENST00000485530 FHP07954 510 aa11.5□□□□□ -0.57
TRA2B-213ENST00000485530 RNH1P13489 461 aaKnown RBP11.5□□□□□ -0.57
TRA2B-213ENST00000485530 MDH1P40925 334 aaKnown RBP11.5□□□□□ -0.57
TRA2B-213ENST00000485530 HK2P52789 917 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms