RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 NR6A1Q15406 480 aa11.17□□□□□ -0.62
APTX-227ENST00000485479 NSDHLQ15738 373 aa11.17□□□□□ -0.62
APTX-227ENST00000485479 CCNYL2Q5T2Q4 361 aa11.17□□□□□ -0.62
APTX-227ENST00000485479 Q6ZSR9 355 aa11.17□□□□□ -0.62
APTX-227ENST00000485479 CLYBLQ8N0X4 340 aa11.17□□□□□ -0.62
APTX-227ENST00000485479 SRFBP1Q8NEF9 429 aaKnown RBP11.17□□□□□ -0.62
APTX-227ENST00000485479 MAGEB10Q96LZ2 347 aaPredicted RBP11.17□□□□□ -0.62
APTX-227ENST00000485479 NUF2Q9BZD4 464 aa11.17□□□□□ -0.62
APTX-227ENST00000485479 TGIF2Q9GZN2 237 aa11.17□□□□□ -0.62
APTX-227ENST00000485479 DDX31Q9H8H2 851 aaKnown RBP11.17□□□□□ -0.62
APTX-227ENST00000485479 INTS9Q9NV88 658 aaKnown RBP11.17□□□□□ -0.62
APTX-227ENST00000485479 FBXL4Q9UKA2 621 aa11.17□□□□□ -0.62
APTX-227ENST00000485479 NXT1Q9UKK6 140 aaKnown RBP11.17□□□□□ -0.62
APTX-227ENST00000485479 KMT2BQ9UMN6 2715 aaPredicted RBP11.16□□□□□ -0.62
APTX-227ENST00000485479 GNG14A0A1W2PPG7 69 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 TMEM114B3SHH9 223 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 FGF17O60258 216 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 PRMT3O60678 531 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 PEX11AO75192 247 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 SCELO95171 688 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 FAM87AP0C7U9 286 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 MAPK12P53778 367 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 SLC18A1P54219 525 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 RPL38P63173 70 aaKnown RBP11.16□□□□□ -0.62
APTX-227ENST00000485479 MC1RQ01726 317 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 ACSM2AQ08AH3 577 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 ZNF750Q32MQ0 723 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 VWA5B1Q5TIE3 1220 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 ACSM2BQ68CK6 577 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 GPR155Q7Z3F1 870 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 GPR180Q86V85 440 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 OR11G2Q8NGC1 345 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 CLHC1Q8NHS4 586 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 CHTF18Q8WVB6 975 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 ZNF75CPQ92670 426 aaPredicted RBP11.16□□□□□ -0.62
APTX-227ENST00000485479 C1orf50Q9BV19 199 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 ZNF160Q9HCG1 818 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 DLGAP4Q9Y2H0 992 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 ASB4Q9Y574 426 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 CLDN16Q9Y5I7 305 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 TNRC6AQ8NDV7 1962 aaKnown RBP11.16□□□□□ -0.62
APTX-227ENST00000485479 PGRMC2O15173 223 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 PCDH7O60245 1069 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 SNNO75324 88 aaPredicted RBP11.16□□□□□ -0.62
APTX-227ENST00000485479 SEC22BO75396 215 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 SEMA3DO95025 777 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 GRK2P25098 689 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 ALDH9A1P49189 494 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 NAA20P61599 178 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 SF3A3Q12874 501 aaKnown RBP eCLIP11.16□□□□□ -0.62
APTX-227ENST00000485479 RFTN2Q52LD8 501 aaPredicted RBP11.16□□□□□ -0.62
APTX-227ENST00000485479 FAM47EQ6ZV65 393 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 TRIM46Q7Z4K8 759 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 PARP9Q8IXQ6 854 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 NUDT8Q8WV74 236 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 GFM2Q969S9 779 aaKnown RBP11.16□□□□□ -0.62
APTX-227ENST00000485479 THOC1Q96FV9 657 aaKnown RBP11.16□□□□□ -0.62
APTX-227ENST00000485479 EGLN2Q96KS0 407 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 OR1F2PQ96R84 312 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 ILKAPQ9H0C8 392 aaPredicted RBP11.16□□□□□ -0.62
APTX-227ENST00000485479 ING2Q9H160 280 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 PRTFDC1Q9NRG1 225 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 POLHQ9Y253 713 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 RAP2CQ9Y3L5 183 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 KCNMB2Q9Y691 235 aa11.16□□□□□ -0.62
APTX-227ENST00000485479 LSM1O15116 133 aaKnown RBP11.15□□□□□ -0.62
APTX-227ENST00000485479 PROM1O43490 865 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 CHEK2O96017 543 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 FGF4P08620 206 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 COX6A1P12074 109 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 ACPPP15309 386 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 JAK1P23458 1154 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 TACR1P25103 407 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 SERPINB5P36952 375 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 RPL14P50914 215 aaKnown RBP11.15□□□□□ -0.62
APTX-227ENST00000485479 CCL11P51671 97 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 TAS2R50P59544 299 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 OCRLQ01968 901 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 TNFRSF17Q02223 184 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 Q0VFX4 171 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 TBR1Q16650 682 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 SFT2D3Q587I9 215 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 HSP90B2PQ58FF3 399 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 COLEC12Q5KU26 742 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 NDUFAF5Q5TEU4 345 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 MRM1Q6IN84 353 aaKnown RBP11.15□□□□□ -0.62
APTX-227ENST00000485479 ANKRD37Q7Z713 158 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 RAB43Q86YS6 212 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 ZCCHC7Q8N3Z6 543 aaKnown RBP11.15□□□□□ -0.62
APTX-227ENST00000485479 GBP7Q8N8V2 638 aaPredicted RBP11.15□□□□□ -0.62
APTX-227ENST00000485479 METTL21AQ8WXB1 218 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 PPWD1Q96BP3 646 aaKnown RBP11.15□□□□□ -0.62
APTX-227ENST00000485479 C19orf60Q96EN9 201 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 RPF2Q9H7B2 306 aaKnown RBP11.15□□□□□ -0.62
APTX-227ENST00000485479 PNO1Q9NRX1 252 aaKnown RBP11.15□□□□□ -0.62
APTX-227ENST00000485479 SEMA3GQ9NS98 782 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 HEY2Q9UBP5 337 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 BAIAP2L1Q9UHR4 511 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 PPT2Q9UMR5 302 aa11.15□□□□□ -0.62
APTX-227ENST00000485479 ZFYVE26Q68DK2 2539 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms