RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 WIPI1Q5MNZ9 446 aaPredicted RBP16.47■□□□□ 0.23
DDR1-245ENST00000484556 PIWIL4Q7Z3Z4 852 aaKnown RBP16.47■□□□□ 0.23
DDR1-245ENST00000484556 TC2NQ8N9U0 490 aa16.47■□□□□ 0.23
DDR1-245ENST00000484556 OR8D2Q9GZM6 311 aa16.47■□□□□ 0.23
DDR1-245ENST00000484556 KLHL31Q9H511 634 aa16.47■□□□□ 0.23
DDR1-245ENST00000484556 PROK2Q9HC23 129 aa16.47■□□□□ 0.23
DDR1-245ENST00000484556 TFR2Q9UP52 801 aa16.47■□□□□ 0.23
DDR1-245ENST00000484556 SLC6A5Q9Y345 797 aa16.47■□□□□ 0.23
DDR1-245ENST00000484556 ERI2A8K979 691 aaKnown RBP16.46■□□□□ 0.23
DDR1-245ENST00000484556 E7EVH7 732 aa16.46■□□□□ 0.23
DDR1-245ENST00000484556 ZNF189O75820 626 aaPredicted RBP16.46■□□□□ 0.23
DDR1-245ENST00000484556 TJP3O95049 919 aa16.46■□□□□ 0.23
DDR1-245ENST00000484556 IFNA16P05015 189 aa16.46■□□□□ 0.23
DDR1-245ENST00000484556 CTNNA1P35221 906 aaKnown RBP16.46■□□□□ 0.23
DDR1-245ENST00000484556 HADHBP55084 474 aaKnown RBP16.46■□□□□ 0.23
DDR1-245ENST00000484556 RNF4P78317 190 aa16.46■□□□□ 0.23
DDR1-245ENST00000484556 CCZ1BP86790 482 aa16.46■□□□□ 0.23
DDR1-245ENST00000484556 CCZ1P86791 482 aaPredicted RBP16.46■□□□□ 0.23
DDR1-245ENST00000484556 NAE1Q13564 534 aa16.46■□□□□ 0.23
DDR1-245ENST00000484556 PHKG1Q16816 387 aa16.46■□□□□ 0.23
DDR1-245ENST00000484556 TTLL9Q3SXZ7 439 aa16.46■□□□□ 0.23
DDR1-245ENST00000484556 DCST1Q5T197 706 aa16.46■□□□□ 0.23
DDR1-245ENST00000484556 SLC22A10Q63ZE4 541 aa16.46■□□□□ 0.23
DDR1-245ENST00000484556 AGTRAPQ6RW13 159 aa16.46■□□□□ 0.23
DDR1-245ENST00000484556 CES3Q6UWW8 571 aa16.46■□□□□ 0.23
DDR1-245ENST00000484556 PM20D2Q8IYS1 436 aa16.46■□□□□ 0.23
DDR1-245ENST00000484556 WFIKKN1Q96NZ8 548 aa16.46■□□□□ 0.23
DDR1-245ENST00000484556 SH2D2AQ9NP31 389 aa16.46■□□□□ 0.23
DDR1-245ENST00000484556 QPCTLQ9NXS2 382 aa16.46■□□□□ 0.23
DDR1-245ENST00000484556 INTUQ9ULD6 942 aa16.46■□□□□ 0.23
DDR1-245ENST00000484556 CLCA3PQ9Y6N3 262 aa16.46■□□□□ 0.23
DDR1-245ENST00000484556 TRBC2A0A5B9 178 aa16.45■□□□□ 0.22
DDR1-245ENST00000484556 AKR1B15C9JRZ8 316 aaPredicted RBP16.45■□□□□ 0.22
DDR1-245ENST00000484556 SNPHO15079 494 aa16.45■□□□□ 0.22
DDR1-245ENST00000484556 VAPBO95292 243 aa16.45■□□□□ 0.22
DDR1-245ENST00000484556 FAM157CP0CG43 387 aa16.45■□□□□ 0.22
DDR1-245ENST00000484556 MPC1LP0DKB6 136 aa16.45■□□□□ 0.22
DDR1-245ENST00000484556 CCR8P51685 355 aa16.45■□□□□ 0.22
DDR1-245ENST00000484556 SESN2P58004 480 aaPredicted RBP16.45■□□□□ 0.22
DDR1-245ENST00000484556 ASPHQ12797 758 aa16.45■□□□□ 0.22
DDR1-245ENST00000484556 ELAVL1Q15717 326 aaKnown RBP16.45■□□□□ 0.22
DDR1-245ENST00000484556 CLEC12BQ2HXU8 276 aa16.45■□□□□ 0.22
DDR1-245ENST00000484556 PCID2Q5JVF3 399 aa16.45■□□□□ 0.22
DDR1-245ENST00000484556 C11orf63Q6NUN7 778 aa16.45■□□□□ 0.22
DDR1-245ENST00000484556 LCTLQ6UWM7 567 aa16.45■□□□□ 0.22
DDR1-245ENST00000484556 PLXDC2Q6UX71 529 aa16.45■□□□□ 0.22
DDR1-245ENST00000484556 CYHR1Q6ZMK1 362 aa16.45■□□□□ 0.22
DDR1-245ENST00000484556 PLEKHM3Q6ZWE6 761 aa16.45■□□□□ 0.22
DDR1-245ENST00000484556 TMEM132CQ8N3T6 1108 aa16.45■□□□□ 0.22
DDR1-245ENST00000484556 ZNF441Q8N8Z8 693 aa16.45■□□□□ 0.22
DDR1-245ENST00000484556 FAM47BQ8NA70 645 aa16.45■□□□□ 0.22
DDR1-245ENST00000484556 TMEM171Q8WVE6 324 aa16.45■□□□□ 0.22
DDR1-245ENST00000484556 IGFBPL1Q8WX77 278 aa16.45■□□□□ 0.22
DDR1-245ENST00000484556 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.44■□□□□ 0.225e-7■□□□□ 11
DDR1-245ENST00000484556 A0A0G2JN53 185 aa16.44■□□□□ 0.22
DDR1-245ENST00000484556 TRAPPC6AO75865 159 aa16.44■□□□□ 0.22
DDR1-245ENST00000484556 SMIM10L1P0DMW3 83 aa16.44■□□□□ 0.22
DDR1-245ENST00000484556 NPPBP16860 134 aa16.44■□□□□ 0.22
DDR1-245ENST00000484556 SOX18P35713 384 aa16.44■□□□□ 0.22
DDR1-245ENST00000484556 SLCO1A2P46721 670 aa16.44■□□□□ 0.22
DDR1-245ENST00000484556 HSD17B7P56937 341 aa16.44■□□□□ 0.22
DDR1-245ENST00000484556 SF3B4Q15427 424 aaKnown RBP eCLIP16.44■□□□□ 0.226e-7■■■■■ 30.8
DDR1-245ENST00000484556 ZNF791Q3KP31 576 aaPredicted RBP16.44■□□□□ 0.22
DDR1-245ENST00000484556 TOR1AIP1Q5JTV8 583 aa16.44■□□□□ 0.22
DDR1-245ENST00000484556 MRNIPQ6NTE8 343 aa16.44■□□□□ 0.22
DDR1-245ENST00000484556 SYDE1Q6ZW31 735 aaPredicted RBP16.44■□□□□ 0.22
DDR1-245ENST00000484556 SDCCAG8Q86SQ7 713 aaPredicted RBP16.44■□□□□ 0.22
DDR1-245ENST00000484556 CNGA4Q8IV77 575 aa16.44■□□□□ 0.22
DDR1-245ENST00000484556 PAQR8Q8TEZ7 354 aa16.44■□□□□ 0.22
DDR1-245ENST00000484556 PTPMT1Q8WUK0 201 aaPredicted RBP16.44■□□□□ 0.22
DDR1-245ENST00000484556 SLC44A1Q8WWI5 657 aa16.44■□□□□ 0.22
DDR1-245ENST00000484556 SMIM10Q96HG1 83 aa16.44■□□□□ 0.22
DDR1-245ENST00000484556 SGPP1Q9BX95 441 aa16.44■□□□□ 0.22
DDR1-245ENST00000484556 REG4Q9BYZ8 158 aa16.44■□□□□ 0.22
DDR1-245ENST00000484556 AICDAQ9GZX7 198 aa16.44■□□□□ 0.22
DDR1-245ENST00000484556 CLK4Q9HAZ1 481 aaKnown RBP16.44■□□□□ 0.22
DDR1-245ENST00000484556 ZNF701Q9NV72 531 aaPredicted RBP16.44■□□□□ 0.22
DDR1-245ENST00000484556 ZFP69BQ9UJL9 534 aa16.44■□□□□ 0.22
DDR1-245ENST00000484556 ADAMTS6Q9UKP5 1117 aa16.44■□□□□ 0.22
DDR1-245ENST00000484556 A8MV72 311 aaPredicted RBP16.43■□□□□ 0.22
DDR1-245ENST00000484556 KCNAB3O43448 404 aa16.43■□□□□ 0.22
DDR1-245ENST00000484556 PAX1P15863 534 aa16.43■□□□□ 0.22
DDR1-245ENST00000484556 CRYGSP22914 178 aa16.43■□□□□ 0.22
DDR1-245ENST00000484556 MC3RP41968 323 aa16.43■□□□□ 0.22
DDR1-245ENST00000484556 SCTRP47872 440 aa16.43■□□□□ 0.22
DDR1-245ENST00000484556 FAM27E3Q08E93 113 aa16.43■□□□□ 0.22
DDR1-245ENST00000484556 RUNX2Q13950 521 aa16.43■□□□□ 0.22
DDR1-245ENST00000484556 VASNQ6EMK4 673 aa16.43■□□□□ 0.22
DDR1-245ENST00000484556 PRUNE1Q86TP1 453 aa16.43■□□□□ 0.22
DDR1-245ENST00000484556 CPNE9Q8IYJ1 553 aa16.43■□□□□ 0.22
DDR1-245ENST00000484556 GCNT2Q8N0V5 402 aa16.43■□□□□ 0.22
DDR1-245ENST00000484556 MORN4Q8NDC4 146 aa16.43■□□□□ 0.22
DDR1-245ENST00000484556 FAM13CQ8NE31 585 aa16.43■□□□□ 0.22
DDR1-245ENST00000484556 ABHD11Q8NFV4 315 aa16.43■□□□□ 0.22
DDR1-245ENST00000484556 OR10G3Q8NGC4 313 aa16.43■□□□□ 0.22
DDR1-245ENST00000484556 OR4K1Q8NGD4 311 aa16.43■□□□□ 0.22
DDR1-245ENST00000484556 SLC2A12Q8TD20 617 aa16.43■□□□□ 0.22
DDR1-245ENST00000484556 DAZLQ92904 295 aaKnown RBP16.43■□□□□ 0.22
DDR1-245ENST00000484556 PYCR2Q96C36 320 aa16.43■□□□□ 0.22
DDR1-245ENST00000484556 MFSD3Q96ES6 412 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms