RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 NUDT9Q9BW91 350 aa19.64■□□□□ 0.73
SEC13-217ENST00000482647 NECTIN3Q9NQS3 549 aa19.64■□□□□ 0.73
SEC13-217ENST00000482647 LYARQ9NX58 379 aaKnown RBP19.64■□□□□ 0.73
SEC13-217ENST00000482647 VPS29Q9UBQ0 182 aa19.64■□□□□ 0.73
SEC13-217ENST00000482647 ADAM29Q9UKF5 820 aa19.64■□□□□ 0.73
SEC13-217ENST00000482647 FBXW2Q9UKT8 454 aa19.64■□□□□ 0.73
SEC13-217ENST00000482647 TP53TG5Q9Y2B4 290 aa19.64■□□□□ 0.73
SEC13-217ENST00000482647 ZNF451Q9Y4E5 1061 aa19.64■□□□□ 0.73
SEC13-217ENST00000482647 TIMM22Q9Y584 194 aa19.64■□□□□ 0.73
SEC13-217ENST00000482647 TLN1Q9Y490 2541 aaKnown RBP19.64■□□□□ 0.73
SEC13-217ENST00000482647 IGKV3D-11A0A0A0MRZ8 115 aa19.63■□□□□ 0.73
SEC13-217ENST00000482647 A0A0A6YYD5 115 aa19.63■□□□□ 0.73
SEC13-217ENST00000482647 TCRBV16S1A1N1A0A5B0 115 aa19.63■□□□□ 0.73
SEC13-217ENST00000482647 ARHGAP10A1A4S6 786 aa19.63■□□□□ 0.73
SEC13-217ENST00000482647 SYNDIG1LA6NDD5 238 aa19.63■□□□□ 0.73
SEC13-217ENST00000482647 NPHS1O60500 1241 aa19.63■□□□□ 0.73
SEC13-217ENST00000482647 FAM58BPP0C7Q3 252 aa19.63■□□□□ 0.73
SEC13-217ENST00000482647 VWA5B1Q5TIE3 1220 aa19.63■□□□□ 0.73
SEC13-217ENST00000482647 AGAP7PQ5VUJ5 663 aa19.63■□□□□ 0.73
SEC13-217ENST00000482647 RIPOR1Q6ZS17 1223 aa19.63■□□□□ 0.73
SEC13-217ENST00000482647 SCUBE1Q8IWY4 988 aa19.63■□□□□ 0.73
SEC13-217ENST00000482647 METTL4Q8N3J2 472 aa19.63■□□□□ 0.73
SEC13-217ENST00000482647 EFCAB3Q8N7B9 438 aa19.63■□□□□ 0.73
SEC13-217ENST00000482647 TMEM52Q8NDY8 209 aa19.63■□□□□ 0.73
SEC13-217ENST00000482647 AGAP4Q96P64 663 aa19.63■□□□□ 0.73
SEC13-217ENST00000482647 HBEGFQ99075 208 aa19.63■□□□□ 0.73
SEC13-217ENST00000482647 SMAD5Q99717 465 aaKnown RBP19.63■□□□□ 0.73
SEC13-217ENST00000482647 WDR77Q9BQA1 342 aaPredicted RBP19.63■□□□□ 0.73
SEC13-217ENST00000482647 MRPL1Q9BYD6 325 aaKnown RBP19.63■□□□□ 0.73
SEC13-217ENST00000482647 EML4Q9HC35 981 aaKnown RBP19.63■□□□□ 0.73
SEC13-217ENST00000482647 K7EM74 188 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 ZWINTO95229 277 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 PRB1P04280 392 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 KLK1P06870 262 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 PRR35P0CG20 571 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 UROSP10746 265 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 SERPINB5P36952 375 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 SERPINB4P48594 390 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 HNRNPFP52597 415 aaKnown RBP19.62■□□□□ 0.73
SEC13-217ENST00000482647 FOXA1P55317 472 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 NFATC3Q12968 1075 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 EXT1Q16394 746 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 CCNYL2Q5T2Q4 361 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 PLAG1Q6DJT9 500 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 JMJD6Q6NYC1 403 aaPredicted RBP19.62■□□□□ 0.73
SEC13-217ENST00000482647 PAPD4Q6PIY7 484 aaKnown RBP19.62■□□□□ 0.73
SEC13-217ENST00000482647 NUDCD3Q8IVD9 361 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 HOMEZQ8IX15 550 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 C7orf57Q8NEG2 295 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 SHCBP1LQ9BZQ2 653 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 TMBIM4Q9HC24 238 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 C5AR2Q9P296 337 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 ATG4BQ9Y4P1 393 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 ASB4Q9Y574 426 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 SPTA1P02549 2419 aa19.62■□□□□ 0.73
SEC13-217ENST00000482647 SERTM1A2A2V5 107 aa19.61■□□□□ 0.73
SEC13-217ENST00000482647 BIRC5O15392 142 aa19.61■□□□□ 0.73
SEC13-217ENST00000482647 PROM1O43490 865 aa19.61■□□□□ 0.73
SEC13-217ENST00000482647 TMPRSS11DO60235 418 aa19.61■□□□□ 0.73
SEC13-217ENST00000482647 GBAP04062 536 aa19.61■□□□□ 0.73
SEC13-217ENST00000482647 PDGFAP04085 211 aa19.61■□□□□ 0.73
SEC13-217ENST00000482647 BUD31P41223 144 aaPredicted RBP19.61■□□□□ 0.73
SEC13-217ENST00000482647 TBL3Q12788 808 aaKnown RBP19.61■□□□□ 0.73
SEC13-217ENST00000482647 STX4Q12846 297 aa19.61■□□□□ 0.73
SEC13-217ENST00000482647 FAM219BQ5XKK7 198 aa19.61■□□□□ 0.73
SEC13-217ENST00000482647 MRM1Q6IN84 353 aaKnown RBP19.61■□□□□ 0.73
SEC13-217ENST00000482647 COMMD6Q7Z4G1 85 aa19.61■□□□□ 0.73
SEC13-217ENST00000482647 CLNKQ7Z7G1 428 aa19.61■□□□□ 0.73
SEC13-217ENST00000482647 CUZD1Q86UP6 607 aa19.61■□□□□ 0.73
SEC13-217ENST00000482647 HPS6Q86YV9 775 aa19.61■□□□□ 0.73
SEC13-217ENST00000482647 TANKQ92844 425 aa19.61■□□□□ 0.73
SEC13-217ENST00000482647 ZNF552Q9H707 407 aaPredicted RBP19.61■□□□□ 0.73
SEC13-217ENST00000482647 RPF2Q9H7B2 306 aaKnown RBP19.61■□□□□ 0.73
SEC13-217ENST00000482647 MED13Q9UHV7 2174 aa19.6■□□□□ 0.73
SEC13-217ENST00000482647 AZIN1O14977 448 aa19.6■□□□□ 0.73
SEC13-217ENST00000482647 H2AFXP16104 143 aaPredicted RBP19.6■□□□□ 0.73
SEC13-217ENST00000482647 NR1D1P20393 614 aa19.6■□□□□ 0.73
SEC13-217ENST00000482647 HTR6P50406 440 aa19.6■□□□□ 0.73
SEC13-217ENST00000482647 HNRNPH2P55795 449 aaKnown RBP19.6■□□□□ 0.73
SEC13-217ENST00000482647 TNFRSF17Q02223 184 aa19.6■□□□□ 0.73
SEC13-217ENST00000482647 GALNT1Q10472 559 aaPredicted RBP19.6■□□□□ 0.73
SEC13-217ENST00000482647 BTBD16Q32M84 506 aa19.6■□□□□ 0.73
SEC13-217ENST00000482647 ARL13AQ5H913 290 aaPredicted RBP19.6■□□□□ 0.73
SEC13-217ENST00000482647 HDXQ7Z353 690 aa19.6■□□□□ 0.73
SEC13-217ENST00000482647 ZNF843Q8N446 348 aa19.6■□□□□ 0.73
SEC13-217ENST00000482647 PPP1R14CQ8TAE6 165 aa19.6■□□□□ 0.73
SEC13-217ENST00000482647 M1APQ8TC57 530 aa19.6■□□□□ 0.73
SEC13-217ENST00000482647 TM9SF4Q92544 642 aa19.6■□□□□ 0.73
SEC13-217ENST00000482647 ACPTQ9BZG2 426 aa19.6■□□□□ 0.73
SEC13-217ENST00000482647 WDR41Q9HAD4 459 aa19.6■□□□□ 0.73
SEC13-217ENST00000482647 CFAP46Q8IYW2 2715 aa19.6■□□□□ 0.73
SEC13-217ENST00000482647 A0A1W2PR48 441 aa19.59■□□□□ 0.73
SEC13-217ENST00000482647 GUCY1B2O75343 617 aa19.59■□□□□ 0.73
SEC13-217ENST00000482647 CHN1P15882 459 aa19.59■□□□□ 0.73
SEC13-217ENST00000482647 TPP2P29144 1249 aaPredicted RBP19.59■□□□□ 0.73
SEC13-217ENST00000482647 SERPINB3P29508 390 aa19.59■□□□□ 0.73
SEC13-217ENST00000482647 PPP2R1BP30154 601 aa19.59■□□□□ 0.73
SEC13-217ENST00000482647 MAPK12P53778 367 aa19.59■□□□□ 0.73
SEC13-217ENST00000482647 MAGOHP61326 146 aaKnown RBP19.59■□□□□ 0.73
SEC13-217ENST00000482647 HMGCS1Q01581 520 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms