RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 SLC39A4Q6P5W5 647 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 DHRS13Q6UX07 377 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 SUMF1Q8NBK3 374 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 FBXL8Q96CD0 374 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 C12orf66Q96MD2 445 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 FRMD8P1Q9BZ68 369 aaPredicted RBP3.09□□□□□ -1.92
SMC6-208ENST00000481708 OR2AG1Q9H205 316 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 XKR8Q9H6D3 395 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 HAUS4Q9H6D7 363 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 AHSPQ9NZD4 102 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 WDR83OSQ9Y284 106 aa3.09□□□□□ -1.92
SMC6-208ENST00000481708 KLF2Q9Y5W3 355 aaPredicted RBP3.09□□□□□ -1.92
SMC6-208ENST00000481708 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.08□□□□□ -1.92
SMC6-208ENST00000481708 TMEM191CA6NGB0 347 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 VGLL3A8MV65 326 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 NPIPB6E9PJ23 425 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 PRRG1O14668 218 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 YY2O15391 372 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 DFNA5O60443 496 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 GPC4O75487 556 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 CSTAP01040 98 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 CA3P07451 260 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 F7P08709 466 aaPredicted RBP3.08□□□□□ -1.92
SMC6-208ENST00000481708 TMEM191BP0C7N4 346 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 ST6GAL1P15907 406 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 CCT8P50990 548 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 VAV2P52735 878 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 ACLYP53396 1101 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 HSP90AA4PQ58FG1 418 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 VWA5B1Q5TIE3 1220 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 FAM46CQ5VWP2 391 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 TTC23Q5W5X9 447 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 CEP85Q6P2H3 762 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 SCARA5Q6ZMJ2 495 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 LINGO2Q7L985 606 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 LRRC75A-AS1Q8N1F1 130 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 SPATA6LQ8N4H0 392 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 SYT8Q8NBV8 401 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 TMEM174Q8WUU8 243 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 LARP4BQ92615 738 aaKnown RBP3.08□□□□□ -1.92
SMC6-208ENST00000481708 LINGO1Q96FE5 620 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 C8orf76Q96K31 380 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 ATP6V1G3Q96LB4 118 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 FAM210AQ96ND0 272 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 CCNL2Q96S94 520 aaPredicted RBP3.08□□□□□ -1.92
SMC6-208ENST00000481708 SPAG8Q99932 426 aaPredicted RBP3.08□□□□□ -1.92
SMC6-208ENST00000481708 CINPQ9BW66 212 aaPredicted RBP3.08□□□□□ -1.92
SMC6-208ENST00000481708 CCDC94Q9BW85 323 aaPredicted RBP3.08□□□□□ -1.92
SMC6-208ENST00000481708 TM2D2Q9BX73 214 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 NPFFR1Q9GZQ6 430 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 LHPPQ9H008 270 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 FBXO44Q9H4M3 255 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 ZDHHC6Q9H6R6 413 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 DKK2Q9UBU2 259 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 PRDM4Q9UKN5 801 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 TMED3Q9Y3Q3 217 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 COL1A2P08123 1366 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 H0YIZ8 118 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 PDXKO00764 312 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 SSX4O60224 188 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 CDC14BO60729 498 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 CLPXO76031 633 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 ITGAMP11215 1152 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 UCP1P25874 307 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 LCN1P31025 176 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 ANP32AP39687 249 aaKnown RBP3.08□□□□□ -1.92
SMC6-208ENST00000481708 PRCPP42785 496 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 ASCL1P50553 236 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 HSPA14Q0VDF9 509 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 ZBTB17Q13105 803 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 PTGISQ16647 500 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 FAM174BQ3ZCQ3 159 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 ZNF385BQ569K4 471 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 LRRC38Q5VT99 294 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 AGAP6Q5VW22 663 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 LIPNQ5VXI9 398 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 OGFOD2Q6N063 350 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 ENPP7Q6UWV6 458 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 OLFML1Q6UWY5 402 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 TMPRSS11FQ6ZWK6 438 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 LHFPL4Q7Z7J7 247 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 VSTM4Q8IW00 320 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 SPEM1Q8N4L4 309 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 CSGALNACT2Q8N6G5 542 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 OR5M8Q8NGP6 311 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 SLC25A43Q8WUT9 341 aaPredicted RBP3.08□□□□□ -1.92
SMC6-208ENST00000481708 ISG20Q96AZ6 181 aaKnown RBP3.08□□□□□ -1.92
SMC6-208ENST00000481708 NPAS2Q99743 824 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 SSX3Q99909 188 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 MSTO1Q9BUK6 570 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 ROPN1BQ9BZX4 212 aaPredicted RBP3.08□□□□□ -1.92
SMC6-208ENST00000481708 CATSPERBQ9H7T0 1116 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 RNF24Q9Y225 148 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 DUSP10Q9Y6W6 482 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 LAMA2P24043 3122 aaKnown RBP3.08□□□□□ -1.92
SMC6-208ENST00000481708 ZNF638Q14966 1978 aaKnown RBP3.08□□□□□ -1.92
SMC6-208ENST00000481708 H3BMM5 538 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 ABCD4O14678 606 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 NDUFS4O43181 175 aa3.08□□□□□ -1.92
SMC6-208ENST00000481708 UPK3AO75631 287 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms