RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 AKAP9Q99996 3911 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 OR2W5A6NFC9 320 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 A6NL46 340 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 TMEM114B3SHH9 223 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 FOXE1O00358 373 aaPredicted RBP8.54□□□□□ -1.04
VCP-206ENST00000480327 PLPP1O14494 284 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 CHST10O43529 356 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 CNOT3O75175 753 aaKnown RBP8.54□□□□□ -1.04
VCP-206ENST00000480327 SKAP2O75563 359 aaPredicted RBP8.54□□□□□ -1.04
VCP-206ENST00000480327 JRKO75564 520 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 KLF7O75840 302 aaPredicted RBP8.54□□□□□ -1.04
VCP-206ENST00000480327 CBX6O95503 412 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 GBAP04062 536 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 LINC00032P0C843 101 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 UROSP10746 265 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 PIM1P11309 404 aaPredicted RBP8.54□□□□□ -1.04
VCP-206ENST00000480327 GRK2P25098 689 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 CERS1P27544 350 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 SERPINB5P36952 375 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 DCTP40126 519 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 SSR2P43308 183 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 HMGCS1Q01581 520 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 TGM3Q08188 693 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 RAPSNQ13702 412 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 RUNX2Q13950 521 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 DSG2Q14126 1118 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 NCF4Q15080 339 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 AP5B1Q2VPB7 878 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 ADPRMQ3LIE5 342 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 PLEKHN1Q494U1 663 aaPredicted RBP8.54□□□□□ -1.04
VCP-206ENST00000480327 TMEM35AQ53FP2 167 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 SPDYAQ5MJ70 313 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 MFSD4BQ5TF39 518 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 KANK2Q63ZY3 851 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 OR4C11Q6IEV9 310 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 ZNF793Q6ZN11 406 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 OVCH1Q7RTY7 1134 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 DDIASQ8IXT1 998 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 AFAP1L2Q8N4X5 818 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 ZNF781Q8N8C0 355 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 OR51Q1Q8NH59 317 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 ZNF75CPQ92670 426 aaPredicted RBP8.54□□□□□ -1.04
VCP-206ENST00000480327 PNPLA2Q96AD5 504 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 RGMAQ96B86 450 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 SNRNP40Q96DI7 357 aaKnown RBP8.54□□□□□ -1.04
VCP-206ENST00000480327 MVB12AQ96EY5 273 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 PEX11GQ96HA9 241 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 PPP1R36Q96LQ0 422 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 QRFPRQ96P65 431 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 SORT1Q99523 831 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 SERPINI1Q99574 410 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 DPH2Q9BQC3 489 aaPredicted RBP8.54□□□□□ -1.04
VCP-206ENST00000480327 CENPKQ9BS16 269 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 MRPL1Q9BYD6 325 aaKnown RBP8.54□□□□□ -1.04
VCP-206ENST00000480327 ACPTQ9BZG2 426 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 MANSC1Q9H8J5 431 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 PRDM7Q9NQW5 492 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 INTS9Q9NV88 658 aaKnown RBP8.54□□□□□ -1.04
VCP-206ENST00000480327 ZNF282Q9UDV7 671 aaPredicted RBP8.54□□□□□ -1.04
VCP-206ENST00000480327 FBXW2Q9UKT8 454 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 NTNG1Q9Y2I2 539 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 PTRH2Q9Y3E5 179 aaKnown RBP8.54□□□□□ -1.04
VCP-206ENST00000480327 TSC22D4Q9Y3Q8 395 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 ZNF451Q9Y4E5 1061 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 PCDHGB7Q9Y5F8 929 aa8.54□□□□□ -1.04
VCP-206ENST00000480327 SVILO95425 2214 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 CELSR1Q9NYQ6 3014 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 FAM227AF5H4B4 570 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 H0YIG0 161 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 PIP5K1BO14986 540 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 B3GALT2O43825 422 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 EEDO75530 441 aaKnown RBP8.53□□□□□ -1.04
VCP-206ENST00000480327 CDC123O75794 336 aaPredicted RBP8.53□□□□□ -1.04
VCP-206ENST00000480327 CHEK2O96017 543 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 KITP10721 976 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 ATP5A1P25705 553 aaKnown RBP8.53□□□□□ -1.04
VCP-206ENST00000480327 BSGP35613 385 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 FOLR3P41439 243 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 XCR1P46094 333 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 MTTPP55157 894 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 OCA2Q04671 838 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 GALNT1Q10472 559 aaPredicted RBP8.53□□□□□ -1.04
VCP-206ENST00000480327 CSTF3Q12996 717 aaKnown RBP8.53□□□□□ -1.04
VCP-206ENST00000480327 SLAMF1Q13291 335 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 CUL3Q13618 768 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 NR6A1Q15406 480 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 NKG7Q16617 165 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 IMPG1Q17R60 797 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 ATG16L1Q676U5 607 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 FAAH2Q6GMR7 532 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 MRPL14Q6P1L8 145 aaKnown RBP8.53□□□□□ -1.04
VCP-206ENST00000480327 LAPTM4BQ86VI4 370 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 TRIM42Q8IWZ5 723 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 CLYBLQ8N0X4 340 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 CA13Q8N1Q1 262 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 C1orf52Q8N6N3 182 aaKnown RBP8.53□□□□□ -1.04
VCP-206ENST00000480327 ACOT4Q8N9L9 421 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 SRFBP1Q8NEF9 429 aaKnown RBP8.53□□□□□ -1.04
VCP-206ENST00000480327 PRR7Q8TB68 274 aa8.53□□□□□ -1.04
VCP-206ENST00000480327 STT3BQ8TCJ2 826 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms