RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.29□□□□□ -0.76
CCDC18-208ENST00000479653 DMGDHQ9UI17 866 aaKnown RBP10.29□□□□□ -0.76
CCDC18-208ENST00000479653 RAB21Q9UL25 225 aa10.29□□□□□ -0.76
CCDC18-208ENST00000479653 SLC22A7Q9Y694 548 aa10.29□□□□□ -0.76
CCDC18-208ENST00000479653 V9GYY5 206 aaPredicted RBP10.29□□□□□ -0.76
CCDC18-208ENST00000479653 A8MV72 311 aaPredicted RBP10.28□□□□□ -0.76
CCDC18-208ENST00000479653 E7ENX8 843 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 MYO1CO00159 1063 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 PSMD12O00232 456 aaPredicted RBP10.28□□□□□ -0.76
CCDC18-208ENST00000479653 PSMD3O43242 534 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 MATN4O95460 622 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 SLC16A8O95907 504 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 B3GALT4O96024 378 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 SLC35G6P0C7Q6 338 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 FAM157CP0CG43 387 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 RPL22P35268 128 aaKnown RBP10.28□□□□□ -0.76
CCDC18-208ENST00000479653 ATP5J2P56134 94 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 PRAMEP78395 509 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 SARNPP82979 210 aaKnown RBP10.28□□□□□ -0.76
CCDC18-208ENST00000479653 CDK16Q00536 496 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 SRSF2Q01130 221 aaKnown RBP10.28□□□□□ -0.76
CCDC18-208ENST00000479653 TAP2Q03519 686 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 VEZF1Q14119 521 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 CAPRIN1Q14444 709 aaKnown RBP10.28□□□□□ -0.76
CCDC18-208ENST00000479653 MORF4L2Q15014 288 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 PARP6Q2NL67 630 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 RNF187Q5TA31 235 aaPredicted RBP10.28□□□□□ -0.76
CCDC18-208ENST00000479653 CAPN13Q6MZZ7 669 aaPredicted RBP10.28□□□□□ -0.76
CCDC18-208ENST00000479653 PLEKHM3Q6ZWE6 761 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 ZNF534Q76KX8 674 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 NEIL3Q8TAT5 605 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 ZNF480Q8WV37 535 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 TM4SF19Q96DZ7 209 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 THAP11Q96EK4 314 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 SCYL1Q96KG9 808 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 TRIB1Q96RU8 372 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 RASL10BQ96S79 203 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 WDR83Q9BRX9 315 aaKnown RBP10.28□□□□□ -0.76
CCDC18-208ENST00000479653 AARSD1Q9BTE6 412 aaKnown RBP10.28□□□□□ -0.76
CCDC18-208ENST00000479653 PARD6BQ9BYG5 372 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 TRIM31Q9BZY9 425 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 LRRC40Q9H9A6 602 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 PRDM9Q9NQV7 894 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 JKAMPQ9P055 326 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 ZFATQ9P243 1243 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 MYOTQ9UBF9 498 aa10.28□□□□□ -0.76
CCDC18-208ENST00000479653 ZNF223Q9UK11 482 aaPredicted RBP10.28□□□□□ -0.76
CCDC18-208ENST00000479653 CCDC151A5D8V7 595 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 ERI2A8K979 691 aaKnown RBP10.27□□□□□ -0.77
CCDC18-208ENST00000479653 E7EVH7 732 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 AP3B1O00203 1094 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 DYNC1I1O14576 645 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 DNALI1O14645 258 aaPredicted RBP10.27□□□□□ -0.77
CCDC18-208ENST00000479653 CD5LO43866 347 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 LCMT2O60294 686 aaKnown RBP10.27□□□□□ -0.77
CCDC18-208ENST00000479653 GALR3O60755 368 aaPredicted RBP10.27□□□□□ -0.77
CCDC18-208ENST00000479653 SEC31AO94979 1220 aaKnown RBP10.27□□□□□ -0.77
CCDC18-208ENST00000479653 CATP04040 527 aaKnown RBP10.27□□□□□ -0.77
CCDC18-208ENST00000479653 SERPIND1P05546 499 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 RFPL3SP0C7P2 107 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 HRH2P25021 359 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 PSMA3P25788 255 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 PIGAP37287 484 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 VPS41P49754 854 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 BMPR2Q13873 1038 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 SF3B4Q15427 424 aaKnown RBP eCLIP10.27□□□□□ -0.772e-8■■■■■ 37
CCDC18-208ENST00000479653 TRIP13Q15645 432 aaPredicted RBP10.27□□□□□ -0.77
CCDC18-208ENST00000479653 AARS2Q5JTZ9 985 aaKnown RBP10.27□□□□□ -0.77
CCDC18-208ENST00000479653 NSUN5P2Q63ZY6 315 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 PPP1R21Q6ZMI0 780 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 PPIL6Q8IXY8 311 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 TMEM171Q8WVE6 324 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 IFT81Q8WYA0 676 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 SGCZQ96LD1 299 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 JSRP1Q96MG2 331 aaPredicted RBP10.27□□□□□ -0.77
CCDC18-208ENST00000479653 REG4Q9BYZ8 158 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 DPH5Q9H2P9 285 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 LRTM1Q9HBL6 345 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 RAB6BQ9NRW1 208 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 SNX24Q9Y343 169 aa10.27□□□□□ -0.77
CCDC18-208ENST00000479653 IGKV3D-11A0A0A0MRZ8 115 aa10.26□□□□□ -0.77
CCDC18-208ENST00000479653 AVILO75366 819 aa10.26□□□□□ -0.77
CCDC18-208ENST00000479653 TMIGD3P0DMS9 266 aaPredicted RBP10.26□□□□□ -0.77
CCDC18-208ENST00000479653 CCL3P10147 92 aa10.26□□□□□ -0.77
CCDC18-208ENST00000479653 ALOX12P18054 663 aa10.26□□□□□ -0.77
CCDC18-208ENST00000479653 MAGEA6P43360 314 aa10.26□□□□□ -0.77
CCDC18-208ENST00000479653 RPL21P46778 160 aaKnown RBP10.26□□□□□ -0.77
CCDC18-208ENST00000479653 TTPAP49638 278 aa10.26□□□□□ -0.77
CCDC18-208ENST00000479653 GDF10P55107 478 aa10.26□□□□□ -0.77
CCDC18-208ENST00000479653 EIF3BP55884 814 aaKnown RBP10.26□□□□□ -0.77
CCDC18-208ENST00000479653 SKP1P63208 163 aa10.26□□□□□ -0.77
CCDC18-208ENST00000479653 KCNJ2P63252 427 aa10.26□□□□□ -0.77
CCDC18-208ENST00000479653 BASP1P80723 227 aaKnown RBP10.26□□□□□ -0.77
CCDC18-208ENST00000479653 MRPS25P82663 173 aaKnown RBP10.26□□□□□ -0.77
CCDC18-208ENST00000479653 CLEC12BQ2HXU8 276 aa10.26□□□□□ -0.77
CCDC18-208ENST00000479653 TSTD2Q5T7W7 516 aa10.26□□□□□ -0.77
CCDC18-208ENST00000479653 EMBQ6PCB8 327 aa10.26□□□□□ -0.77
CCDC18-208ENST00000479653 GOLM1Q8NBJ4 401 aa10.26□□□□□ -0.77
CCDC18-208ENST00000479653 ZNF740Q8NDX6 193 aa10.26□□□□□ -0.77
CCDC18-208ENST00000479653 OR52K1Q8NGK4 314 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms