RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ADAMTS18Q8TE60 1221 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 NACC2Q96BF6 587 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 THOC3Q96J01 351 aaKnown RBP6.48□□□□□ -1.37
BRCA1-215ENST00000478531 NUDT9Q9BW91 350 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 ZNF717Q9BY31 904 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-215ENST00000478531 ACPTQ9BZG2 426 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 ADNPQ9H2P0 1102 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 BRF2Q9HAW0 419 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 CLK4Q9HAZ1 481 aaKnown RBP6.48□□□□□ -1.37
BRCA1-215ENST00000478531 TMBIM4Q9HC24 238 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 LYRM4Q9HD34 91 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 SSU72Q9NP77 194 aaKnown RBP6.48□□□□□ -1.37
BRCA1-215ENST00000478531 TNFRSF12AQ9NP84 129 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 ATP13A2Q9NQ11 1180 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 NECTIN3Q9NQS3 549 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 PRTFDC1Q9NRG1 225 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 RIC8BQ9NVN3 520 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 ACTL7BQ9Y614 415 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 FASNP49327 2511 aaKnown RBP6.48□□□□□ -1.37
BRCA1-215ENST00000478531 RELNP78509 3460 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 A0A0A6YYD5 115 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 TMEM120BA0PK00 339 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 GLOD5A6NK44 160 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 TMEM233B4DJY2 109 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 K7EM74 188 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 CLDN4O14493 209 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 TM9SF1O15321 606 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 TMPRSS11DO60235 418 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 LDB3O75112 727 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 SEMA3DO95025 777 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 SCELO95171 688 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 ZWINTO95229 277 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 KLK1P06870 262 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 BPGMP07738 259 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 CHN1P15882 459 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 H2AFXP16104 143 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-215ENST00000478531 BSGP35613 385 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 ETV4P43268 484 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 TSFMP43897 325 aaKnown RBP6.48□□□□□ -1.37
BRCA1-215ENST00000478531 PGDP52209 483 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 HNRNPH2P55795 449 aaKnown RBP6.48□□□□□ -1.37
BRCA1-215ENST00000478531 NAA20P61599 178 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 BTKQ06187 659 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 Q0VFX4 171 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 NFATC3Q12968 1075 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 CSTF3Q12996 717 aaKnown RBP6.48□□□□□ -1.37
BRCA1-215ENST00000478531 CHI3L2Q15782 390 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 IMPG1Q17R60 797 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 BTBD16Q32M84 506 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 LACTB2Q53H82 288 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-215ENST00000478531 COLEC12Q5KU26 742 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 SPDYAQ5MJ70 313 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 C18orf63Q68DL7 685 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 PAPD4Q6PIY7 484 aaKnown RBP6.48□□□□□ -1.37
BRCA1-215ENST00000478531 PAGE2Q7Z2X7 111 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 HDXQ7Z353 690 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 GPR180Q86V85 440 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 NUDCD3Q8IVD9 361 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 ZNF595Q8IYB9 648 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 C1orf52Q8N6N3 182 aaKnown RBP6.48□□□□□ -1.37
BRCA1-215ENST00000478531 CNDP1Q96KN2 507 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 ZNF700Q9H0M5 742 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 PRDM9Q9NQV7 894 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 PNO1Q9NRX1 252 aaKnown RBP6.48□□□□□ -1.37
BRCA1-215ENST00000478531 AHSPQ9NZD4 102 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 VPS29Q9UBQ0 182 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 PPT2Q9UMR5 302 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 PTGDR2Q9Y5Y4 395 aa6.48□□□□□ -1.37
BRCA1-215ENST00000478531 LOC102723996A0A087X1L8 192 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 TGFBR3LH3BV60 316 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 CYR61O00622 381 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 PCDH17O14917 1159 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 AZIN1O14977 448 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 NPHS1O60500 1241 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 LYPLA1O75608 230 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-215ENST00000478531 PDGFAP04085 211 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 IFNA16P05015 189 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 CYC1P08574 325 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 FAM58BPP0C7Q3 252 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 PRR35P0CG20 571 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 NR2F6P10588 404 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 UROSP10746 265 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 HSD3B1P14060 373 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 HSD3B2P26439 372 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 PPP2R1BP30154 601 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 TLX1P31314 330 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-215ENST00000478531 BUD31P41223 144 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-215ENST00000478531 MAPK12P53778 367 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 TNFRSF17Q02223 184 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 GALNT1Q10472 559 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-215ENST00000478531 STX4Q12846 297 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 MPP2Q14168 576 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 ARL13AQ5H913 290 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-215ENST00000478531 SH2D4BQ5SQS7 431 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 CCNYL2Q5T2Q4 361 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 HHATQ5VTY9 493 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 ASB18Q6ZVZ8 466 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 PTRH1Q86Y79 214 aaKnown RBP6.47□□□□□ -1.37
BRCA1-215ENST00000478531 SCUBE1Q8IWY4 988 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 KBTBD2Q8IY47 623 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms