RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 PTBP2Q9UKA9 531 aaKnown RBP13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 ZGRF1Q86YA3 2104 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 SUPT3HB4E1H0 165 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 CYR61O00622 381 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 SUPT3HO75486 399 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 OR2J2O76002 312 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 WISP3O95389 354 aaPredicted RBP13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 TLX1P31314 330 aaPredicted RBP13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 PTGER1P34995 402 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 CASP2P42575 452 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 RAP1GDS1P52306 607 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 HSF1Q00613 529 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 NDUFAF5Q5TEU4 345 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 RTL4Q6ZR62 310 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 CD163Q86VB7 1156 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 SPATA6LQ8N4H0 392 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 SPATA4Q8NEY3 305 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 SDCCAG3Q96C92 435 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 REPS1Q96D71 796 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 SGCZQ96LD1 299 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 SPOCK3Q9BQ16 436 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 PELOQ9BRX2 385 aaKnown RBP13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 ALOXE3Q9BYJ1 711 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 OR8D2Q9GZM6 311 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 AICDAQ9GZX7 198 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 KCMF1Q9P0J7 381 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 VTI1BQ9UEU0 232 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 PHF11Q9UIL8 331 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 ASB1Q9Y576 335 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 ANGPTL3Q9Y5C1 460 aa13.44□□□□□ -0.26
SMARCE1-209ENST00000478349 A0A1B0GTH9 108 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 C17orf105B2RV13 164 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 K7EPI3 171 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 TAPBPO15533 448 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 HS6ST1O60243 411 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 KERAO60938 352 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 SNRPB2P08579 225 aaKnown RBP13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 LTA4HP09960 611 aaKnown RBP13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 PCNAP12004 261 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 EPB42P16452 691 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 HIST1H1TP22492 207 aaPredicted RBP13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 CPN2P22792 545 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 PIK3CGP48736 1102 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 GPR143P51810 404 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 GPR85P60893 370 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 PLIN5Q00G26 463 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 OR4D1Q15615 310 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 FAM83EQ2M2I3 478 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 RNFT1Q5M7Z0 435 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 KLC3Q6P597 504 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 CCDC25Q86WR0 208 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 ZNF227Q86WZ6 799 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 PPM1NQ8N819 430 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 ACOT4Q8N9L9 421 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 GOLM1Q8NBJ4 401 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 UBTD2Q8WUN7 234 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 F2RL3Q96RI0 385 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 DMRTA2Q96SC8 542 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 FAM173AQ9BQD7 235 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 MS4A8Q9BY19 250 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 ALG9Q9H6U8 611 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 SLC24A3Q9HC58 644 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 SMYD2Q9NRG4 433 aa13.43□□□□□ -0.26
SMARCE1-209ENST00000478349 SCN2AQ99250 2005 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 A0A087X1B8 175 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 FIGNL2A6NMB9 653 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 CXorf49A8MYA2 514 aaPredicted RBP13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 FOXO6A8MYZ6 492 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 BCKDKO14874 412 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 RAD51CO43502 376 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 SCELO95171 688 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 CAPN3P20807 821 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 ATP5A1P25705 553 aaKnown RBP13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 CHRNB4P30926 498 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 BUD31P41223 144 aaPredicted RBP13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 HNRNPFP52597 415 aaKnown RBP13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 ARFIP1P53367 373 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 PLTPP55058 493 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 PPIAP62937 165 aaKnown RBP13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 E2F2Q14209 437 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 KBTBD12Q3ZCT8 623 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 CMPK2Q5EBM0 449 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 KHDRBS2Q5VWX1 349 aaKnown RBP13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 IL20RBQ6UXL0 311 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 CEP128Q6ZU80 1094 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 ACAD11Q709F0 780 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 MDGA2Q7Z553 956 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 VN1R5Q7Z5H4 357 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 MYLK4Q86YV6 388 aaPredicted RBP13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 LAS2Q8IYD9 372 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 DND1Q8IYX4 353 aaKnown RBP13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 SLC22A8Q8TCC7 542 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 SLC2A12Q8TD20 617 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 ZNF473Q8WTR7 871 aaKnown RBP13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 RND1Q92730 232 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 C14orf79Q96F83 325 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 RBM18Q96H35 190 aaKnown RBP13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 LURAP1Q96LR2 239 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 DGAT2Q96PD7 388 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 RASL10BQ96S79 203 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms