RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 WISP1O95388 367 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 F10P00742 488 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 MYL2P10916 166 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 CPN2P22792 545 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 TSFMP43897 325 aaKnown RBP14.59□□□□□ -0.07
HMGA1-206ENST00000478214 ARFIP1P53367 373 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 ZNF33BQ06732 778 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 INPP5JQ15735 1006 aaPredicted RBP14.59□□□□□ -0.07
HMGA1-206ENST00000478214 CCDC153Q494R4 210 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 ABHD17BQ5VST6 288 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 H3F3CQ6NXT2 135 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 ZCCHC7Q8N3Z6 543 aaKnown RBP14.59□□□□□ -0.07
HMGA1-206ENST00000478214 RIBC1Q8N443 379 aaPredicted RBP14.59□□□□□ -0.07
HMGA1-206ENST00000478214 KIF2BQ8N4N8 673 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 EFCAB3Q8N7B9 438 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 CDYL2Q8N8U2 506 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 NFAM1Q8NET5 270 aaPredicted RBP14.59□□□□□ -0.07
HMGA1-206ENST00000478214 MYRIPQ8NFW9 859 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 MIB2Q96AX9 1013 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 L3HYPDHQ96EM0 354 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 ZNF382Q96SR6 550 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 SERPINI1Q99574 410 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 PNO1Q9NRX1 252 aaKnown RBP14.59□□□□□ -0.07
HMGA1-206ENST00000478214 TRPS1Q9UHF7 1281 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 LGALS13Q9UHV8 139 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 RAB21Q9UL25 225 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 ATG4BQ9Y4P1 393 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 SPACA6W5XKT8 324 aa14.59□□□□□ -0.07
HMGA1-206ENST00000478214 A0A0A6YYD5 115 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 DYTNA2CJ06 578 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 TMPRSS11DO60235 418 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 LDB3O75112 727 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 MYO1DO94832 1006 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 SEMA3DO95025 777 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 WDPCPO95876 746 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 PDYNP01213 254 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 GBAP04062 536 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 HNRNPH2P55795 449 aaKnown RBP14.58□□□□□ -0.08
HMGA1-206ENST00000478214 ARG2P78540 354 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 ID2Q02363 134 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 STX4Q12846 297 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 TCHHL1Q5QJ38 904 aaPredicted RBP14.58□□□□□ -0.08
HMGA1-206ENST00000478214 C10orf62Q5T681 223 aaPredicted RBP14.58□□□□□ -0.08
HMGA1-206ENST00000478214 MRM1Q6IN84 353 aaKnown RBP14.58□□□□□ -0.08
HMGA1-206ENST00000478214 GPRIN3Q6ZVF9 776 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 TRABD2AQ86V40 505 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 GPR180Q86V85 440 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 CRLF3Q8IUI8 442 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 IQCKQ8N0W5 287 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 MREGQ8N565 214 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 CCNYL1Q8N7R7 359 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 ELP5Q8TE02 316 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 SELENOMQ8WWX9 145 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 CCDC126Q96EE4 140 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 HBEGFQ99075 208 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 NPAS2Q99743 824 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 MRPL1Q9BYD6 325 aaKnown RBP14.58□□□□□ -0.08
HMGA1-206ENST00000478214 ROPN1BQ9BZX4 212 aaPredicted RBP14.58□□□□□ -0.08
HMGA1-206ENST00000478214 GSTO2Q9H4Y5 243 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 DDX31Q9H8H2 851 aaKnown RBP14.58□□□□□ -0.08
HMGA1-206ENST00000478214 ROPN1Q9HAT0 212 aaPredicted RBP14.58□□□□□ -0.08
HMGA1-206ENST00000478214 STMN3Q9NZ72 180 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 TEKT2Q9UIF3 430 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 SNX6Q9UNH7 406 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 ASB4Q9Y574 426 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 PCDHGA10Q9Y5H3 936 aa14.58□□□□□ -0.08
HMGA1-206ENST00000478214 MANBAO00462 879 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 MAN1A2O60476 641 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 PRKRAO75569 313 aaKnown RBP14.57□□□□□ -0.08
HMGA1-206ENST00000478214 MLYCDO95822 493 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 ST13P50502 369 aaKnown RBP14.57□□□□□ -0.08
HMGA1-206ENST00000478214 NAGLUP54802 743 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 LCP2Q13094 533 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 ZNF169Q14929 603 aaPredicted RBP14.57□□□□□ -0.08
HMGA1-206ENST00000478214 TLR1Q15399 786 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 ACER2Q5QJU3 275 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 C18orf63Q68DL7 685 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 NUDT13Q86X67 352 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 OR4N5Q8IXE1 308 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 SRRM1Q8IYB3 904 aaKnown RBP14.57□□□□□ -0.08
HMGA1-206ENST00000478214 CISD2Q8N5K1 135 aaKnown RBP14.57□□□□□ -0.08
HMGA1-206ENST00000478214 CCDC63Q8NA47 563 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 B3GNT7Q8NFL0 401 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 RDH11Q8TC12 318 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 METTL6Q8TCB7 284 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 HAS2Q92819 552 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 ANKRD9Q96BM1 317 aaPredicted RBP14.57□□□□□ -0.08
HMGA1-206ENST00000478214 SNRNP40Q96DI7 357 aaKnown RBP14.57□□□□□ -0.08
HMGA1-206ENST00000478214 C19orf60Q96EN9 201 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 ZNF354BQ96LW1 612 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 ALOXE3Q9BYJ1 711 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 ADAP2Q9NPF8 381 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 LYARQ9NX58 379 aaKnown RBP14.57□□□□□ -0.08
HMGA1-206ENST00000478214 MS4A12Q9NXJ0 267 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 PHF11Q9UIL8 331 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 SLC12A4Q9UP95 1085 aa14.57□□□□□ -0.08
HMGA1-206ENST00000478214 RP1L1Q8IWN7 2480 aaPredicted RBP14.56□□□□□ -0.08
HMGA1-206ENST00000478214 BLACEA4D250 179 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 PROM1O43490 865 aa14.56□□□□□ -0.08
HMGA1-206ENST00000478214 FGF17O60258 216 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms