RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 KCMF1Q9P0J7 381 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 C19orf25Q9UFG5 118 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-222ENST00000478095 TP53TG5Q9Y2B4 290 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 ACTL7BQ9Y614 415 aa9.65□□□□□ -0.86
HDAC6-222ENST00000478095 PCM1Q15154 2024 aa9.65□□□□□ -0.87
HDAC6-222ENST00000478095 SEC16AO15027 2179 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 NBEAQ8NFP9 2946 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 MDC1Q14676 2089 aaKnown RBP9.64□□□□□ -0.87
HDAC6-222ENST00000478095 IGKV3D-11A0A0A0MRZ8 115 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 A0A0A6YYD5 115 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 ARHGAP10A1A4S6 786 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 EIF4E1BA6NMX2 242 aaKnown RBP9.64□□□□□ -0.87
HDAC6-222ENST00000478095 A8MUA0 341 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 TMEM233B4DJY2 109 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 TGFBR3LH3BV60 316 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 SEMA3DO95025 777 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 KLK1P06870 262 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 PPP2R1BP30154 601 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 ARRB2P32121 409 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 TSFMP43897 325 aaKnown RBP9.64□□□□□ -0.87
HDAC6-222ENST00000478095 OR4D2P58180 307 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 NAA20P61599 178 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 ID2Q02363 134 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 GALNT1Q10472 559 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-222ENST00000478095 TBL3Q12788 808 aaKnown RBP9.64□□□□□ -0.87
HDAC6-222ENST00000478095 NFATC3Q12968 1075 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 CSTF3Q12996 717 aaKnown RBP9.64□□□□□ -0.87
HDAC6-222ENST00000478095 AIMP2Q13155 320 aaKnown RBP9.64□□□□□ -0.87
HDAC6-222ENST00000478095 SLC13A2Q13183 592 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 ARL13AQ5H913 290 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-222ENST00000478095 COLEC12Q5KU26 742 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 C10orf62Q5T681 223 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-222ENST00000478095 C18orf63Q68DL7 685 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 PAPD4Q6PIY7 484 aaKnown RBP9.64□□□□□ -0.87
HDAC6-222ENST00000478095 CYP20A1Q6UW02 462 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 QSOX2Q6ZRP7 698 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 COMMD6Q7Z4G1 85 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 GPR180Q86V85 440 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 NUDCD3Q8IVD9 361 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 SCUBE1Q8IWY4 988 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 ZCCHC7Q8N3Z6 543 aaKnown RBP9.64□□□□□ -0.87
HDAC6-222ENST00000478095 C1orf52Q8N6N3 182 aaKnown RBP9.64□□□□□ -0.87
HDAC6-222ENST00000478095 PPP1R14CQ8TAE6 165 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 ADAMTS18Q8TE60 1221 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 ARL8AQ96BM9 186 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 THOC3Q96J01 351 aaKnown RBP9.64□□□□□ -0.87
HDAC6-222ENST00000478095 CNDP1Q96KN2 507 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 PAIP2Q9BPZ3 127 aaKnown RBP9.64□□□□□ -0.87
HDAC6-222ENST00000478095 WDR77Q9BQA1 342 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-222ENST00000478095 ZNF700Q9H0M5 742 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 SLC25A18Q9H1K4 315 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 ADNPQ9H2P0 1102 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 DDX31Q9H8H2 851 aaKnown RBP9.64□□□□□ -0.87
HDAC6-222ENST00000478095 BRF2Q9HAW0 419 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 PRDM9Q9NQV7 894 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 RIC8BQ9NVN3 520 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 PSD3Q9NYI0 1048 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 GPR83Q9NYM4 423 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 PPT2Q9UMR5 302 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 MRPS33Q9Y291 106 aaKnown RBP9.64□□□□□ -0.87
HDAC6-222ENST00000478095 ATG4BQ9Y4P1 393 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 PTGDR2Q9Y5Y4 395 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 SPACA6W5XKT8 324 aa9.64□□□□□ -0.87
HDAC6-222ENST00000478095 ATMQ13315 3056 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 CACNA1GO43497 2377 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 A0A1W2PQ72 361 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 TCRBV16S1A1N1A0A5B0 115 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 TMEM120BA0PK00 339 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 GLOD5A6NK44 160 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 WASHC1A8K0Z3 465 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 CLDN4O14493 209 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 PCDH17O14917 1159 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 AZIN1O14977 448 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 TM9SF1O15321 606 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 NPHS1O60500 1241 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 LDB3O75112 727 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 CEACAM4O75871 244 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 ZWINTO95229 277 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 CYC1P08574 325 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 FAM58BPP0C7Q3 252 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 PRR35P0CG20 571 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 HSD3B1P14060 373 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 HSD3B2P26439 372 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 TPP2P29144 1249 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-222ENST00000478095 PGDP52209 483 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 HSD17B7P56937 341 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 TNFRSF17Q02223 184 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 BTKQ06187 659 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 ACTN3Q08043 901 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-222ENST00000478095 RCN2Q14257 317 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 MYBPC3Q14896 1274 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 LAPTM4AQ15012 233 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 CHI3L2Q15782 390 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 BTBD16Q32M84 506 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 LACTB2Q53H82 288 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-222ENST00000478095 SH2D4BQ5SQS7 431 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 CCNYL2Q5T2Q4 361 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 CES4AQ5XG92 561 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 ATG14Q6ZNE5 492 aa9.63□□□□□ -0.87
HDAC6-222ENST00000478095 RIPOR1Q6ZS17 1223 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms