RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 VIMP08670 466 aaKnown RBP18.78■□□□□ 0.6
ACTB-210ENST00000477812 CD63P08962 238 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 ANXA4P09525 319 aaPredicted RBP18.78■□□□□ 0.6
ACTB-210ENST00000477812 SDC1P18827 310 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 LSP1P33241 339 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 IDH3AP50213 366 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 RPS15P62841 145 aaKnown RBP18.78■□□□□ 0.6
ACTB-210ENST00000477812 TRA2BP62995 288 aaKnown RBP18.78■□□□□ 0.6
ACTB-210ENST00000477812 RHAGQ02094 409 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 EMX2Q04743 252 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 ZNF763Q0D2J5 394 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 TUBB8Q3ZCM7 444 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 RIPOR1Q6ZS17 1223 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 SHISA6Q6ZSJ9 500 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 CLNKQ7Z7G1 428 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 PROSER1Q86XN7 944 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 EFCAB3Q8N7B9 438 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 ACTRT2Q8TDY3 377 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 C16orf78Q8WTQ4 265 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 ZCCHC14Q8WYQ9 949 aaKnown RBP18.78■□□□□ 0.6
ACTB-210ENST00000477812 KIAA1143Q96AT1 154 aaPredicted RBP18.78■□□□□ 0.6
ACTB-210ENST00000477812 OR52B2Q96RD2 323 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 VN1R1Q9GZP7 353 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 SOX17Q9H6I2 414 aaPredicted RBP18.78■□□□□ 0.6
ACTB-210ENST00000477812 KCND3Q9UK17 655 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 PADI2Q9Y2J8 665 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 RAXQ9Y2V3 346 aa18.78■□□□□ 0.6
ACTB-210ENST00000477812 PTRH2Q9Y3E5 179 aaKnown RBP18.78■□□□□ 0.6
ACTB-210ENST00000477812 MRPS18BQ9Y676 258 aaKnown RBP18.78■□□□□ 0.6
ACTB-210ENST00000477812 ACACBO00763 2458 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 ZFHX4Q86UP3 3567 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 IGKV3D-11A0A0A0MRZ8 115 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 GOLGA8QA0A0J9YX86 632 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 GNG14A0A1W2PPG7 69 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 GOLGA8OA6NCC3 632 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 TMEM8BA6NDV4 472 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 OR2W5A6NFC9 320 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 GOLGA8NF8WBI6 632 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 PSMD12O00232 456 aaPredicted RBP18.77■□□□□ 0.6
ACTB-210ENST00000477812 CYC1P08574 325 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 NR2F6P10588 404 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 BCKDHAP12694 445 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 CPN2P22792 545 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 JAK1P23458 1154 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 AQP5P55064 265 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 ERVK-8P63133 956 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 FOXK2Q01167 660 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 SCUBE1Q8IWY4 988 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 SPACA3Q8IXA5 215 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 PRSS58Q8IYP2 241 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 MMP21Q8N119 569 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 FNDC5Q8NAU1 212 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 KDF1Q8NAX2 398 aaPredicted RBP18.77■□□□□ 0.6
ACTB-210ENST00000477812 RFWD2Q8NHY2 731 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 UCN3Q969E3 161 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 SLC45A3Q96JT2 553 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 EBF4Q9BQW3 602 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 C1orf50Q9BV19 199 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 KCNK13Q9HB14 408 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 NPHS2Q9NP85 383 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 MYNNQ9NPC7 610 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 EXO1Q9UQ84 846 aaKnown RBP18.77■□□□□ 0.6
ACTB-210ENST00000477812 CCDC88CQ9P219 2028 aa18.77■□□□□ 0.6
ACTB-210ENST00000477812 ANKRD11Q6UB99 2663 aaPredicted RBP18.77■□□□□ 0.59
ACTB-210ENST00000477812 URB1O60287 2271 aaKnown RBP18.76■□□□□ 0.59
ACTB-210ENST00000477812 IDSB3KWA1 339 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 TGFBR3LH3BV60 316 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 KLK10O43240 276 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 EFSO43281 561 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 DIAPH2O60879 1101 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 B4GALT2O60909 372 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 CDC123O75794 336 aaPredicted RBP18.76■□□□□ 0.59
ACTB-210ENST00000477812 MYO1DO94832 1006 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 IL3P08700 152 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 ALDOCP09972 364 aaKnown RBP18.76■□□□□ 0.59
ACTB-210ENST00000477812 LBPP18428 481 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 GSTM5P46439 218 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 TAS2R50P59544 299 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 BTG2P78543 158 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 IL10RAQ13651 578 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 NDUFAF5Q5TEU4 345 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 IL23RQ5VWK5 629 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 FAM71E1Q6IPT2 247 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 QSOX2Q6ZRP7 698 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 ZNF595Q8IYB9 648 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 THOC1Q96FV9 657 aaKnown RBP18.76■□□□□ 0.59
ACTB-210ENST00000477812 CHMP6Q96FZ7 201 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 EGLN2Q96KS0 407 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 SIKE1Q9BRV8 207 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 CRB3Q9BUF7 120 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 EFHD1Q9BUP0 239 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 PRDM9Q9NQV7 894 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 HEY2Q9UBP5 337 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 C3orf18Q9UK00 162 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 MKL2Q9ULH7 1088 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 WBP11Q9Y2W2 641 aaKnown RBP18.76■□□□□ 0.59
ACTB-210ENST00000477812 PCDHA9Q9Y5H5 950 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 SPACA6W5XKT8 324 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 CFAP47Q6ZTR5 3102 aa18.76■□□□□ 0.59
ACTB-210ENST00000477812 TPRP12270 2363 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms