RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 MRPL49Q13405 166 aaKnown RBP16.54■□□□□ 0.24
PTPN7-209ENST00000477554 CHI3L2Q15782 390 aa16.54■□□□□ 0.24
PTPN7-209ENST00000477554 CPSF6Q16630 551 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTPN7-209ENST00000477554 CFAP157Q5JU67 520 aa16.54■□□□□ 0.24
PTPN7-209ENST00000477554 ATG16L1Q676U5 607 aa16.54■□□□□ 0.24
PTPN7-209ENST00000477554 MED27Q6P2C8 311 aa16.54■□□□□ 0.24
PTPN7-209ENST00000477554 ZADH2Q8N4Q0 377 aa16.54■□□□□ 0.24
PTPN7-209ENST00000477554 TTLQ8NG68 377 aa16.54■□□□□ 0.24
PTPN7-209ENST00000477554 DNAJB14Q8TBM8 379 aa16.54■□□□□ 0.24
PTPN7-209ENST00000477554 CKAP2Q8WWK9 683 aa16.54■□□□□ 0.24
PTPN7-209ENST00000477554 UCN3Q969E3 161 aa16.54■□□□□ 0.24
PTPN7-209ENST00000477554 MTFMTQ96DP5 389 aaKnown RBP16.54■□□□□ 0.24
PTPN7-209ENST00000477554 MAGEB18Q96M61 343 aa16.54■□□□□ 0.24
PTPN7-209ENST00000477554 C1QTNF3Q9BXJ4 246 aa16.54■□□□□ 0.24
PTPN7-209ENST00000477554 ERVK-6Q9BXR3 956 aa16.54■□□□□ 0.24
PTPN7-209ENST00000477554 CLMPQ9H6B4 373 aa16.54■□□□□ 0.24
PTPN7-209ENST00000477554 KCMF1Q9P0J7 381 aa16.54■□□□□ 0.24
PTPN7-209ENST00000477554 URADA6NGE7 173 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 TCP11X1B4DZS4 312 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 PRMT3O60678 531 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 WISP2O76076 250 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 WDPCPO95876 746 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 SERPINE1P05121 402 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 NAGLUP54802 743 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 CDH13P55290 713 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 SLC26A5P58743 744 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 RPS13P62277 151 aaKnown RBP16.53■□□□□ 0.24
PTPN7-209ENST00000477554 GUCY1A3Q02108 690 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 ID2Q02363 134 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 TRAF3Q13114 568 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 ZNF678Q5SXM1 525 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 PLAG1Q6DJT9 500 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 QSOX2Q6ZRP7 698 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 SCUBE1Q8IWY4 988 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 LRRC8CQ8TDW0 803 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 PPP4R1Q8TF05 950 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 FAR2Q96K12 515 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 TMEM237Q96Q45 408 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 ZNF717Q9BY31 904 aaPredicted RBP16.53■□□□□ 0.24
PTPN7-209ENST00000477554 PITHD1Q9GZP4 211 aaPredicted RBP16.53■□□□□ 0.24
PTPN7-209ENST00000477554 ILKAPQ9H0C8 392 aaPredicted RBP16.53■□□□□ 0.24
PTPN7-209ENST00000477554 MANSC1Q9H8J5 431 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 ACTR8Q9H981 624 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 DMRT3Q9NQL9 472 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 ANKRD10Q9NXR5 420 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 MAP10Q9P2G4 905 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 ZNF225Q9UK10 706 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 ANGPTL3Q9Y5C1 460 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 UTP20O75691 2785 aaKnown RBP16.53■□□□□ 0.24
PTPN7-209ENST00000477554 TCRBV16S1A1N1A0A5B0 115 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 PLPP1O14494 284 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 KLF11O14901 512 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 BGNP21810 368 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 ATP5A1P25705 553 aaKnown RBP16.53■□□□□ 0.24
PTPN7-209ENST00000477554 SERPINB5P36952 375 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 RAB38P57729 211 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 LAPTM5Q13571 262 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 PAGE2BQ5JRK9 111 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 TRIM40Q6P9F5 258 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 CRLF3Q8IUI8 442 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 CCNYL1Q8N7R7 359 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 NFAM1Q8NET5 270 aaPredicted RBP16.53■□□□□ 0.24
PTPN7-209ENST00000477554 WDR20Q8TBZ3 569 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 ZNF75CPQ92670 426 aaPredicted RBP16.53■□□□□ 0.24
PTPN7-209ENST00000477554 GATA5Q9BWX5 397 aaPredicted RBP16.53■□□□□ 0.24
PTPN7-209ENST00000477554 SEMA4BQ9NPR2 832 aaPredicted RBP16.53■□□□□ 0.24
PTPN7-209ENST00000477554 FARSBQ9NSD9 589 aaKnown RBP16.53■□□□□ 0.24
PTPN7-209ENST00000477554 DAPP1Q9UN19 280 aa16.53■□□□□ 0.24
PTPN7-209ENST00000477554 ASH1LQ9NR48 2969 aaKnown RBP16.52■□□□□ 0.24
PTPN7-209ENST00000477554 ARHGAP10A1A4S6 786 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 B3GALT2O43825 422 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 NPHS1O60500 1241 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 EEDO75530 441 aaKnown RBP16.52■□□□□ 0.23
PTPN7-209ENST00000477554 SUPT7LO94864 414 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 SNUPNO95149 360 aaKnown RBP16.52■□□□□ 0.23
PTPN7-209ENST00000477554 RPS17P08708 135 aaKnown RBP16.52■□□□□ 0.23
PTPN7-209ENST00000477554 IL10P22301 178 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 MTTPP55157 894 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 ZNF33BQ06732 778 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 ACTN3Q08043 901 aaPredicted RBP16.52■□□□□ 0.23
PTPN7-209ENST00000477554 STX3Q13277 289 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 ZRSR2Q15696 482 aaKnown RBP16.52■□□□□ 0.23
PTPN7-209ENST00000477554 HIST2H2ACQ16777 129 aaPredicted RBP16.52■□□□□ 0.23
PTPN7-209ENST00000477554 TCHHL1Q5QJ38 904 aaPredicted RBP16.52■□□□□ 0.23
PTPN7-209ENST00000477554 ZNF468Q5VIY5 522 aaPredicted RBP16.52■□□□□ 0.23
PTPN7-209ENST00000477554 IRAK1BP1Q5VVH5 260 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 KHDRBS2Q5VWX1 349 aaKnown RBP16.52■□□□□ 0.23
PTPN7-209ENST00000477554 HIST2H2AA3Q6FI13 130 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 BEST3Q8N1M1 668 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 ACOT4Q8N9L9 421 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 L3MBTL4Q8NA19 623 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 OR6Y1Q8NGX8 325 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 DOK4Q8TEW6 326 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 SERINC2Q96SA4 455 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 TRMOQ9BU70 441 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 HES7Q9BYE0 225 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 CCDC134Q9H6E4 229 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 PRDM9Q9NQV7 894 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 C19orf25Q9UFG5 118 aaPredicted RBP16.52■□□□□ 0.23
PTPN7-209ENST00000477554 ZNF223Q9UK11 482 aaPredicted RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms