RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 MFAP5Q13361 173 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 CUL2Q13617 745 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 UPP1Q16831 310 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 NDUFAF5Q5TEU4 345 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 SPOPLQ6IQ16 392 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 FUT10Q6P4F1 479 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 KLC3Q6P597 504 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 TMCO2Q7Z6W1 182 aaPredicted RBP3.6□□□□□ -1.83
UBR3-209ENST00000477461 PRPF39Q86UA1 669 aaKnown RBP3.6□□□□□ -1.83
UBR3-209ENST00000477461 ADIPOR2Q86V24 386 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 CEP57Q86XR8 500 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 ZNF440Q8IYI8 595 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 TDHQ8IZJ6 230 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 THEM5Q8N1Q8 247 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 TMEM86AQ8N2M4 240 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 COLGALT1Q8NBJ5 622 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 SEMA4DQ92854 862 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 ERLEC1Q96DZ1 483 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 SENP8Q96LD8 212 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 EDEM3Q9BZQ6 932 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 CXCL16Q9H2A7 254 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 FAM124BQ9H5Z6 455 aaPredicted RBP3.6□□□□□ -1.83
UBR3-209ENST00000477461 SLA2Q9H6Q3 261 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 ERVMER34-1Q9H9K5 563 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 CYP3A43Q9HB55 503 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 APOBEC3GQ9HC16 384 aaKnown RBP3.6□□□□□ -1.83
UBR3-209ENST00000477461 CHMP1AQ9HD42 196 aaPredicted RBP3.6□□□□□ -1.83
UBR3-209ENST00000477461 PDE7BQ9NP56 450 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.6□□□□□ -1.83
UBR3-209ENST00000477461 ZDHHC18Q9NUE0 388 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 GDAP2Q9NXN4 497 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 TAS2R14Q9NYV8 317 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 SPG21Q9NZD8 308 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 CACNG4Q9UBN1 327 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 FBXL5Q9UKA1 691 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 ADAM28Q9UKQ2 775 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 PCDHGB4Q9UN71 923 aa3.6□□□□□ -1.83
UBR3-209ENST00000477461 PTRH2Q9Y3E5 179 aaKnown RBP3.6□□□□□ -1.83
UBR3-209ENST00000477461 SF3B1O75533 1304 aaKnown RBP eCLIP3.6□□□□□ -1.83
UBR3-209ENST00000477461 PDE4DIPQ5VU43 2346 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 ELOVL7A1L3X0 281 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 A8MXQ7 604 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 F8VZ95 297 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 I3L4J1 428 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 SLC22A2O15244 555 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 MED7O43513 233 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 AHCYL1O43865 530 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 GYPCP04921 128 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 H1F0P07305 194 aaKnown RBP3.59□□□□□ -1.83
UBR3-209ENST00000477461 CA3P07451 260 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 IGHV4-38-2P0DP08 117 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 TYMPP19971 482 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 WARSP23381 471 aaKnown RBP3.59□□□□□ -1.83
UBR3-209ENST00000477461 ACTN2P35609 894 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 NNMTP40261 264 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 CDK3Q00526 305 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 TSPY1Q01534 308 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 KRT33BQ14525 404 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 GARNL3Q5VVW2 1013 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 WSCD1Q658N2 575 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 TMEM270Q6UE05 265 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 VPS36Q86VN1 386 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 UNC93AQ86WB7 457 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 DNAAF5Q86Y56 855 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 SLC39A11Q8N1S5 342 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 SCML4Q8N228 414 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 ZNF843Q8N446 348 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 PPFIBP2Q8ND30 876 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 MCUQ8NE86 351 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 CCDC112Q8NEF3 446 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 OR8K1Q8NGG5 319 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 OR10S1Q8NGN2 331 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 SPATA18Q8TC71 538 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 ARSGQ96EG1 525 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 SGK494Q96LW2 274 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 OR6C1Q96RD1 312 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 TGS1Q96RS0 853 aaKnown RBP3.59□□□□□ -1.83
UBR3-209ENST00000477461 PAFAH2Q99487 392 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 MRPL45Q9BRJ2 306 aaKnown RBP3.59□□□□□ -1.83
UBR3-209ENST00000477461 RHNO1Q9BSD3 238 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 MED10Q9BTT4 135 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 CABLES2Q9BTV7 478 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 GANQ9H2C0 597 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 CWH43Q9H720 699 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 SMYD3Q9H7B4 428 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 SIX2Q9NPC8 291 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 CISHQ9NSE2 258 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 GDE1Q9NZC3 331 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 MTUS1Q9ULD2 1270 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 BARX2Q9UMQ3 279 aaPredicted RBP3.59□□□□□ -1.83
UBR3-209ENST00000477461 ATP8B3O60423 1300 aa3.59□□□□□ -1.83
UBR3-209ENST00000477461 MYO9BQ13459 2157 aa3.59□□□□□ -1.84
UBR3-209ENST00000477461 VWA8A3KMH1 1905 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 MED19A0JLT2 244 aaPredicted RBP3.58□□□□□ -1.84
UBR3-209ENST00000477461 HEPACAM2A8MVW5 462 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 E9PQ18 207 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 EPHB6O15197 1021 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 ERAL1O75616 437 aaKnown RBP3.58□□□□□ -1.84
UBR3-209ENST00000477461 NOL4O94818 638 aa3.58□□□□□ -1.84
UBR3-209ENST00000477461 NGFP01138 241 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms