RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 DMGDHQ9UI17 866 aaKnown RBP10.06□□□□□ -0.8
SEC13-214ENST00000476597 NPIPA1Q9UND3 350 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 TSC22D4Q9Y3Q8 395 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 CREBBPQ92793 2442 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 A0A096LPK6 155 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 MYOCOSA0A1B0GUC4 107 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 SH3BGRLO75368 114 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 ITGA10O75578 1167 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 ALDOAP04075 364 aaKnown RBP10.05□□□□□ -0.8
SEC13-214ENST00000476597 IFNA16P05015 189 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 PCNAP12004 261 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 HIST1H1TP22492 207 aaPredicted RBP10.05□□□□□ -0.8
SEC13-214ENST00000476597 TYK2P29597 1187 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 PIK3CBP42338 1070 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 ALDH18A1P54886 795 aaKnown RBP10.05□□□□□ -0.8
SEC13-214ENST00000476597 STX4Q12846 297 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 ART3Q13508 389 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 SERTAD2Q14140 314 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 SETDB1Q15047 1291 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 PCBP2Q15366 365 aaKnown RBP eCLIP10.05□□□□□ -0.8
SEC13-214ENST00000476597 C3AR1Q16581 482 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 PFKFB4Q16877 469 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 UBAP2Q5T6F2 1119 aaKnown RBP10.05□□□□□ -0.8
SEC13-214ENST00000476597 KHDRBS2Q5VWX1 349 aaKnown RBP10.05□□□□□ -0.8
SEC13-214ENST00000476597 LIPJQ5W064 366 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 OR4C11Q6IEV9 310 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 MTFR2Q6P444 385 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 Q6ZPB1 254 aaPredicted RBP10.05□□□□□ -0.8
SEC13-214ENST00000476597 CEP128Q6ZU80 1094 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 MRGPRGQ86SM5 289 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 ZGRF1Q86YA3 2104 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 SULF2Q8IWU5 870 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 CHERPQ8IWX8 916 aaKnown RBP10.05□□□□□ -0.8
SEC13-214ENST00000476597 TMEM156Q8N614 296 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 CPSF7Q8N684 471 aaKnown RBP10.05□□□□□ -0.8
SEC13-214ENST00000476597 POGLUT1Q8NBL1 392 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 MORN4Q8NDC4 146 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 C7orf57Q8NEG2 295 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 DAZLQ92904 295 aaKnown RBP10.05□□□□□ -0.8
SEC13-214ENST00000476597 ANKRD9Q96BM1 317 aaPredicted RBP10.05□□□□□ -0.8
SEC13-214ENST00000476597 CCDC120Q96HB5 630 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 CCDC77Q9BR77 488 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 TSPAN10Q9H1Z9 355 aaPredicted RBP10.05□□□□□ -0.8
SEC13-214ENST00000476597 OR51B5Q9H339 312 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 SUCOQ9UBS9 1254 aaKnown RBP10.05□□□□□ -0.8
SEC13-214ENST00000476597 ENTPD4Q9Y227 616 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 KLF13Q9Y2Y9 288 aaPredicted RBP10.05□□□□□ -0.8
SEC13-214ENST00000476597 YARS2Q9Y2Z4 477 aaKnown RBP10.05□□□□□ -0.8
SEC13-214ENST00000476597 CLCA3PQ9Y6N3 262 aa10.05□□□□□ -0.8
SEC13-214ENST00000476597 LRRC14BA6NHZ5 514 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 H0YIV9 168 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 KLRC4-KLRK1H3BQV0 150 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 SAP18O00422 153 aaKnown RBP10.04□□□□□ -0.8
SEC13-214ENST00000476597 PEX1O43933 1283 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 UGDHO60701 494 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 LDB3O75112 727 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 GFAPP14136 432 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 CPN2P22792 545 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 PTX3P26022 381 aaPredicted RBP10.04□□□□□ -0.8
SEC13-214ENST00000476597 SERPINB8P50452 374 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 SSR4P51571 173 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 ARFIP1P53367 373 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 CASP6P55212 293 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 SLAMF1Q13291 335 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 BIKQ13323 160 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 UAP1Q16222 522 aaPredicted RBP10.04□□□□□ -0.8
SEC13-214ENST00000476597 METTL2BQ6P1Q9 378 aaKnown RBP10.04□□□□□ -0.8
SEC13-214ENST00000476597 KLC3Q6P597 504 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 HSDL2Q6YN16 418 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 C16orf47Q6ZP98 133 aaPredicted RBP10.04□□□□□ -0.8
SEC13-214ENST00000476597 MDGA2Q7Z553 956 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 GHDCQ8N2G8 530 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 RNF175Q8N4F7 328 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 ZNF808Q8N4W9 903 aaPredicted RBP10.04□□□□□ -0.8
SEC13-214ENST00000476597 OR14A16Q8NHC5 309 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 C16orf52Q8NHV5 167 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 HUS1BQ8NHY5 278 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 SLC44A1Q8WWI5 657 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 ISL2Q96A47 359 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 RGMAQ96B86 450 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 C16orf45Q96MC5 204 aaPredicted RBP10.04□□□□□ -0.8
SEC13-214ENST00000476597 SORBS1Q9BX66 1292 aaKnown RBP10.04□□□□□ -0.8
SEC13-214ENST00000476597 TSPYL1Q9H0U9 437 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 ACTR8Q9H981 624 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 LIN28AQ9H9Z2 209 aaKnown RBP10.04□□□□□ -0.8
SEC13-214ENST00000476597 PSD3Q9NYI0 1048 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 MYOTQ9UBF9 498 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 MTRF1LQ9UGC7 380 aaKnown RBP10.04□□□□□ -0.8
SEC13-214ENST00000476597 SH3BGRL2Q9UJC5 107 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 ANGPTL3Q9Y5C1 460 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 PCDHGA11Q9Y5H2 935 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 TNPO3Q9Y5L0 923 aaKnown RBP10.04□□□□□ -0.8
SEC13-214ENST00000476597 KLF2Q9Y5W3 355 aaPredicted RBP10.04□□□□□ -0.8
SEC13-214ENST00000476597 SPACA6W5XKT8 324 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 CPAMD8Q8IZJ3 1885 aa10.04□□□□□ -0.8
SEC13-214ENST00000476597 C17orf105B2RV13 164 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 PRSS44E7EML9 344 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 OR2J2O76002 312 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 ETHE1O95571 254 aa10.03□□□□□ -0.8
SEC13-214ENST00000476597 ZNF24P17028 368 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms