RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 MED13Q9UHV7 2174 aa13.56□□□□□ -0.24
CCNL1-217ENST00000476367 OR2W5A6NFC9 320 aa13.56□□□□□ -0.24
CCNL1-217ENST00000476367 FAM227AF5H4B4 570 aa13.56□□□□□ -0.24
CCNL1-217ENST00000476367 HDAC3O15379 428 aa13.56□□□□□ -0.24
CCNL1-217ENST00000476367 RSL1D1O76021 490 aaKnown RBP13.56□□□□□ -0.24
CCNL1-217ENST00000476367 HEXBP07686 556 aa13.56□□□□□ -0.24
CCNL1-217ENST00000476367 HNRNPFP52597 415 aaKnown RBP13.56□□□□□ -0.24
CCNL1-217ENST00000476367 HNRNPH2P55795 449 aaKnown RBP13.56□□□□□ -0.24
CCNL1-217ENST00000476367 CHAF1BQ13112 559 aa13.56□□□□□ -0.24
CCNL1-217ENST00000476367 SSPNQ14714 243 aa13.56□□□□□ -0.24
CCNL1-217ENST00000476367 SLC9B1Q4ZJI4 515 aa13.56□□□□□ -0.24
CCNL1-217ENST00000476367 LARP4Q71RC2 724 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCNL1-217ENST00000476367 PPP1R32Q7Z5V6 425 aa13.56□□□□□ -0.24
CCNL1-217ENST00000476367 DDIASQ8IXT1 998 aa13.56□□□□□ -0.24
CCNL1-217ENST00000476367 CA13Q8N1Q1 262 aa13.56□□□□□ -0.24
CCNL1-217ENST00000476367 SRFBP1Q8NEF9 429 aaKnown RBP13.56□□□□□ -0.24
CCNL1-217ENST00000476367 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCNL1-217ENST00000476367 SERINC2Q96SA4 455 aa13.56□□□□□ -0.24
CCNL1-217ENST00000476367 CSF3RQ99062 836 aa13.56□□□□□ -0.24
CCNL1-217ENST00000476367 MAPKAP1Q9BPZ7 522 aa13.56□□□□□ -0.24
CCNL1-217ENST00000476367 TGIF2Q9GZN2 237 aa13.56□□□□□ -0.24
CCNL1-217ENST00000476367 WDR55Q9H6Y2 383 aaPredicted RBP13.56□□□□□ -0.24
CCNL1-217ENST00000476367 FGFR1OP2Q9NVK5 253 aa13.56□□□□□ -0.24
CCNL1-217ENST00000476367 CLDN16Q9Y5I7 305 aa13.56□□□□□ -0.24
CCNL1-217ENST00000476367 CACNA1GO43497 2377 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 ARGFXA6NJG6 315 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 WASHC1A8K0Z3 465 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 PSMD12O00232 456 aaPredicted RBP13.55□□□□□ -0.24
CCNL1-217ENST00000476367 CYR61O00622 381 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 RECKO95980 971 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 KLK1P06870 262 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 FHP07954 510 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 RNH1P13489 461 aaKnown RBP13.55□□□□□ -0.24
CCNL1-217ENST00000476367 MMP11P24347 488 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 TACR1P25103 407 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 EMP2P54851 167 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 LIM2P55344 173 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 AP5B1Q2VPB7 878 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 C6orf136Q5SQH8 315 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 CPZQ66K79 652 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 CRLF3Q8IUI8 442 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 LRRC34Q8IZ02 419 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 MMP21Q8N119 569 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 ZCCHC7Q8N3Z6 543 aaKnown RBP13.55□□□□□ -0.24
CCNL1-217ENST00000476367 FAM47BQ8NA70 645 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 TBC1D20Q96BZ9 403 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 C8orf44Q96CB5 159 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 CATSPER2Q96P56 530 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 EBF4Q9BQW3 602 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 VN1R1Q9GZP7 353 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 AKTIPQ9H8T0 292 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 LANCL2Q9NS86 450 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 SEMA3GQ9NS98 782 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 DAPP1Q9UN19 280 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 EXO1Q9UQ84 846 aaKnown RBP13.55□□□□□ -0.24
CCNL1-217ENST00000476367 ATG4BQ9Y4P1 393 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 HS3ST3B1Q9Y662 390 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 USH1CQ9Y6N9 552 aa13.55□□□□□ -0.24
CCNL1-217ENST00000476367 SMG1Q96Q15 3661 aaKnown RBP13.54□□□□□ -0.24
CCNL1-217ENST00000476367 SLC28A1O00337 649 aa13.54□□□□□ -0.24
CCNL1-217ENST00000476367 POLR3GO15318 223 aaPredicted RBP13.54□□□□□ -0.24
CCNL1-217ENST00000476367 B4GALT2O60909 372 aa13.54□□□□□ -0.24
CCNL1-217ENST00000476367 PEX11AO75192 247 aa13.54□□□□□ -0.24
CCNL1-217ENST00000476367 PRKRAO75569 313 aaKnown RBP13.54□□□□□ -0.24
CCNL1-217ENST00000476367 EPHA3P29320 983 aa13.54□□□□□ -0.24
CCNL1-217ENST00000476367 TSFMP43897 325 aaKnown RBP13.54□□□□□ -0.24
CCNL1-217ENST00000476367 SEC24CP53992 1094 aa13.54□□□□□ -0.24
CCNL1-217ENST00000476367 SLAMF1Q13291 335 aa13.54□□□□□ -0.24
CCNL1-217ENST00000476367 TBR1Q16650 682 aa13.54□□□□□ -0.24
CCNL1-217ENST00000476367 BORAQ6PGQ7 559 aa13.54□□□□□ -0.24
CCNL1-217ENST00000476367 EPGNQ6UW88 154 aa13.54□□□□□ -0.24
CCNL1-217ENST00000476367 MED25Q71SY5 747 aa13.54□□□□□ -0.24
CCNL1-217ENST00000476367 CLNKQ7Z7G1 428 aa13.54□□□□□ -0.24
CCNL1-217ENST00000476367 RFWD2Q8NHY2 731 aa13.54□□□□□ -0.24
CCNL1-217ENST00000476367 THAP4Q8WY91 577 aa13.54□□□□□ -0.24
CCNL1-217ENST00000476367 THOC1Q96FV9 657 aaKnown RBP13.54□□□□□ -0.24
CCNL1-217ENST00000476367 EGLN2Q96KS0 407 aa13.54□□□□□ -0.24
CCNL1-217ENST00000476367 OR1F2PQ96R84 312 aa13.54□□□□□ -0.24
CCNL1-217ENST00000476367 OR52B2Q96RD2 323 aa13.54□□□□□ -0.24
CCNL1-217ENST00000476367 ROGDIQ9GZN7 287 aa13.54□□□□□ -0.24
CCNL1-217ENST00000476367 C1orf109Q9NX04 203 aa13.54□□□□□ -0.24
CCNL1-217ENST00000476367 TEX10Q9NXF1 929 aaPredicted RBP13.54□□□□□ -0.24
CCNL1-217ENST00000476367 P4HTMQ9NXG6 502 aa13.54□□□□□ -0.24
CCNL1-217ENST00000476367 ADAM29Q9UKF5 820 aa13.54□□□□□ -0.24
CCNL1-217ENST00000476367 A0A1W2PR48 441 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 TGFBR3LH3BV60 316 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 MASP2O00187 686 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 PEX12O00623 359 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 SOCS6O14544 535 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 ALOX12BO75342 701 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 CHEK2O96017 543 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 ALDOCP09972 364 aaKnown RBP13.53□□□□□ -0.24
CCNL1-217ENST00000476367 ACPPP15309 386 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 JAK1P23458 1154 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 LSP1P33241 339 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 RAB38P57729 211 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 EEF1A2Q05639 463 aaKnown RBP13.53□□□□□ -0.24
CCNL1-217ENST00000476367 NR6A1Q15406 480 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 LANCL3Q6ZV70 420 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 NUDT13Q86X67 352 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms