RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 FAM219BQ5XKK7 198 aa19.77■□□□□ 0.76
LIME1-204ENST00000476183 RPS19BP1Q86WX3 136 aaKnown RBP19.77■□□□□ 0.76
LIME1-204ENST00000476183 B3GNT7Q8NFL0 401 aa19.77■□□□□ 0.76
LIME1-204ENST00000476183 ATP6V1E2Q96A05 226 aa19.77■□□□□ 0.76
LIME1-204ENST00000476183 RGMAQ96B86 450 aa19.77■□□□□ 0.76
LIME1-204ENST00000476183 REPS1Q96D71 796 aa19.77■□□□□ 0.76
LIME1-204ENST00000476183 SIGLEC12Q96PQ1 595 aa19.77■□□□□ 0.76
LIME1-204ENST00000476183 SEMA4BQ9NPR2 832 aaPredicted RBP19.77■□□□□ 0.76
LIME1-204ENST00000476183 ZNF223Q9UK11 482 aaPredicted RBP19.77■□□□□ 0.76
LIME1-204ENST00000476183 FBXW2Q9UKT8 454 aa19.77■□□□□ 0.76
LIME1-204ENST00000476183 PPIEQ9UNP9 301 aaKnown RBP19.77■□□□□ 0.76
LIME1-204ENST00000476183 ANKUB1A6NFN9 424 aa19.76■□□□□ 0.75
LIME1-204ENST00000476183 GABRR3A8MPY1 467 aa19.76■□□□□ 0.75
LIME1-204ENST00000476183 GOLGA8RI6L899 631 aa19.76■□□□□ 0.75
LIME1-204ENST00000476183 LDB3O75112 727 aa19.76■□□□□ 0.75
LIME1-204ENST00000476183 SEMA7AO75326 666 aa19.76■□□□□ 0.75
LIME1-204ENST00000476183 PTX3P26022 381 aaPredicted RBP19.76■□□□□ 0.75
LIME1-204ENST00000476183 TNFRSF8P28908 595 aa19.76■□□□□ 0.75
LIME1-204ENST00000476183 ARL1P40616 181 aaPredicted RBP19.76■□□□□ 0.75
LIME1-204ENST00000476183 RAP1GDS1P52306 607 aa19.76■□□□□ 0.75
LIME1-204ENST00000476183 SLAMF1Q13291 335 aa19.76■□□□□ 0.75
LIME1-204ENST00000476183 TERF2Q15554 542 aa19.76■□□□□ 0.75
LIME1-204ENST00000476183 FHL5Q5TD97 284 aa19.76■□□□□ 0.75
LIME1-204ENST00000476183 ZNF468Q5VIY5 522 aaPredicted RBP19.76■□□□□ 0.75
LIME1-204ENST00000476183 ZNF324BQ6AW86 544 aaPredicted RBP19.76■□□□□ 0.75
LIME1-204ENST00000476183 FAM180AQ6UWF9 173 aa19.76■□□□□ 0.75
LIME1-204ENST00000476183 LGI4Q8N135 537 aa19.76■□□□□ 0.75
LIME1-204ENST00000476183 MDS2Q8NDY4 140 aa19.76■□□□□ 0.75
LIME1-204ENST00000476183 PRR7Q8TB68 274 aa19.76■□□□□ 0.75
LIME1-204ENST00000476183 ZNF483Q8TF39 744 aaPredicted RBP19.76■□□□□ 0.75
LIME1-204ENST00000476183 MTFMTQ96DP5 389 aaKnown RBP19.76■□□□□ 0.75
LIME1-204ENST00000476183 C1QTNF3Q9BXJ4 246 aa19.76■□□□□ 0.75
LIME1-204ENST00000476183 ANKZF1Q9H8Y5 726 aa19.76■□□□□ 0.75
LIME1-204ENST00000476183 ADAP2Q9NPF8 381 aa19.76■□□□□ 0.75
LIME1-204ENST00000476183 TBK1Q9UHD2 729 aa19.76■□□□□ 0.75
LIME1-204ENST00000476183 FOXO6A8MYZ6 492 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 FOXE1O00358 373 aaPredicted RBP19.75■□□□□ 0.75
LIME1-204ENST00000476183 EEDO75530 441 aaKnown RBP19.75■□□□□ 0.75
LIME1-204ENST00000476183 PYGBP11216 843 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 TSPAN8P19075 237 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 CPN2P22792 545 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 TPP2P29144 1249 aaPredicted RBP19.75■□□□□ 0.75
LIME1-204ENST00000476183 BSGP35613 385 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 CDH13P55290 713 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 MLF1P58340 268 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 ID2Q02363 134 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 SRSF11Q05519 484 aaKnown RBP19.75■□□□□ 0.75
LIME1-204ENST00000476183 OR1C1Q15619 314 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 INAQ16352 499 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 ZNF766Q5HY98 468 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 SPINK14Q6IE38 97 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 ZCCHC7Q8N3Z6 543 aaKnown RBP19.75■□□□□ 0.75
LIME1-204ENST00000476183 BCORP1Q8N888 145 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 ST6GALNAC3Q8NDV1 305 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 OR4F6Q8NGB9 312 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 NCLNQ969V3 563 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 ANKRD9Q96BM1 317 aaPredicted RBP19.75■□□□□ 0.75
LIME1-204ENST00000476183 SLX1AQ9BQ83 275 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 UTP23Q9BRU9 249 aaKnown RBP19.75■□□□□ 0.75
LIME1-204ENST00000476183 HES7Q9BYE0 225 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 ALOXE3Q9BYJ1 711 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 PSD3Q9NYI0 1048 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 ABI3Q9P2A4 366 aa19.75■□□□□ 0.75
LIME1-204ENST00000476183 TRBV11-1A0A0K0K1C0 115 aa19.74■□□□□ 0.75
LIME1-204ENST00000476183 A0A1W2PPM1 405 aa19.74■□□□□ 0.75
LIME1-204ENST00000476183 DLX3O60479 287 aa19.74■□□□□ 0.75
LIME1-204ENST00000476183 ARFIP1P53367 373 aa19.74■□□□□ 0.75
LIME1-204ENST00000476183 HNRNPH2P55795 449 aaKnown RBP19.74■□□□□ 0.75
LIME1-204ENST00000476183 PHEXP78562 749 aa19.74■□□□□ 0.75
LIME1-204ENST00000476183 STX4Q12846 297 aa19.74■□□□□ 0.75
LIME1-204ENST00000476183 CUL3Q13618 768 aa19.74■□□□□ 0.75
LIME1-204ENST00000476183 C18orf63Q68DL7 685 aa19.74■□□□□ 0.75
LIME1-204ENST00000476183 MILR1Q7Z6M3 343 aa19.74■□□□□ 0.75
LIME1-204ENST00000476183 ARMC10Q8N2F6 343 aa19.74■□□□□ 0.75
LIME1-204ENST00000476183 SUN3Q8TAQ9 357 aa19.74■□□□□ 0.75
LIME1-204ENST00000476183 ACMSDQ8TDX5 336 aa19.74■□□□□ 0.75
LIME1-204ENST00000476183 PTPMT1Q8WUK0 201 aaPredicted RBP19.74■□□□□ 0.75
LIME1-204ENST00000476183 UBLCP1Q8WVY7 318 aaPredicted RBP19.74■□□□□ 0.75
LIME1-204ENST00000476183 CENPKQ9BS16 269 aa19.74■□□□□ 0.75
LIME1-204ENST00000476183 DEFB126Q9BYW3 111 aa19.74■□□□□ 0.75
LIME1-204ENST00000476183 OLAHQ9NV23 265 aa19.74■□□□□ 0.75
LIME1-204ENST00000476183 VTI1BQ9UEU0 232 aa19.74■□□□□ 0.75
LIME1-204ENST00000476183 ZNF225Q9UK10 706 aa19.74■□□□□ 0.75
LIME1-204ENST00000476183 PPT2Q9UMR5 302 aa19.74■□□□□ 0.75
LIME1-204ENST00000476183 ATG4BQ9Y4P1 393 aa19.74■□□□□ 0.75
LIME1-204ENST00000476183 SPACA6W5XKT8 324 aa19.74■□□□□ 0.75
LIME1-204ENST00000476183 ICE1Q9Y2F5 2266 aa19.73■□□□□ 0.75
LIME1-204ENST00000476183 A0A0A6YYD5 115 aa19.73■□□□□ 0.75
LIME1-204ENST00000476183 TMPRSS11DO60235 418 aa19.73■□□□□ 0.75
LIME1-204ENST00000476183 FGF17O60258 216 aa19.73■□□□□ 0.75
LIME1-204ENST00000476183 PRKNO60260 465 aaPredicted RBP19.73■□□□□ 0.75
LIME1-204ENST00000476183 PRKRAO75569 313 aaKnown RBP19.73■□□□□ 0.75
LIME1-204ENST00000476183 NEURL1O76050 574 aa19.73■□□□□ 0.75
LIME1-204ENST00000476183 IFNA16P05015 189 aa19.73■□□□□ 0.75
LIME1-204ENST00000476183 RNF224P0DH78 156 aa19.73■□□□□ 0.75
LIME1-204ENST00000476183 EDN3P14138 238 aa19.73■□□□□ 0.75
LIME1-204ENST00000476183 CLCN2P51788 898 aa19.73■□□□□ 0.75
LIME1-204ENST00000476183 PMP22Q01453 160 aa19.73■□□□□ 0.75
LIME1-204ENST00000476183 ELAVL1Q15717 326 aaKnown RBP19.73■□□□□ 0.75
LIME1-204ENST00000476183 GGTA1PQ4G0N0 100 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms