RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 GRID1Q9ULK0 1009 aa10.86□□□□□ -0.67
BRD9-203ENST00000475706 SMG1Q96Q15 3661 aaKnown RBP10.86□□□□□ -0.67
BRD9-203ENST00000475706 GTF3C1Q12789 2109 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 CFAP46Q8IYW2 2715 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 IGKV3D-11A0A0A0MRZ8 115 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 A0A1B0GTL3 188 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 SAGE2PA6NJ88 616 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 TGFBR3LH3BV60 316 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 FOXE1O00358 373 aaPredicted RBP10.85□□□□□ -0.67
BRD9-203ENST00000475706 VPS4BO75351 444 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 MYO1DO94832 1006 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 PPP2R1BP30154 601 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 HMOX2P30519 316 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 BSGP35613 385 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 PRKAA2P54646 552 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 CUL3Q13618 768 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 TLR1Q15399 786 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 MEP1AQ16819 746 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 GGTA1PQ4G0N0 100 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 FAM219BQ5XKK7 198 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 LETMD1Q6P1Q0 360 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 WDR93Q6P2C0 686 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 GPR180Q86V85 440 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 CRLF3Q8IUI8 442 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 OR4N5Q8IXE1 308 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 HAS2Q92819 552 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 C19orf60Q96EN9 201 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 C1QTNF3Q9BXJ4 246 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 PARD6BQ9BYG5 372 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 DEFB126Q9BYW3 111 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 C12orf65Q9H3J6 166 aaKnown RBP10.85□□□□□ -0.67
BRD9-203ENST00000475706 CDCP1Q9H5V8 836 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 CLMPQ9H6B4 373 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 ASF1BQ9NVP2 202 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 AHSPQ9NZD4 102 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 ABI3Q9P2A4 366 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 PHF11Q9UIL8 331 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 EMCNQ9ULC0 261 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 VPS4AQ9UN37 437 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 SNX6Q9UNH7 406 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 SLC12A4Q9UP95 1085 aa10.85□□□□□ -0.67
BRD9-203ENST00000475706 COPG1Q9Y678 874 aaKnown RBP10.85□□□□□ -0.67
BRD9-203ENST00000475706 TRBV11-1A0A0K0K1C0 115 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 EEDO75530 441 aaKnown RBP10.84□□□□□ -0.67
BRD9-203ENST00000475706 SCELO95171 688 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 PDYNP01213 254 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 GBAP04062 536 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 PROCP04070 461 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 KRT4P19013 534 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 TLX1P31314 330 aaPredicted RBP10.84□□□□□ -0.67
BRD9-203ENST00000475706 CRHR1P34998 444 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 BUD31P41223 144 aaPredicted RBP10.84□□□□□ -0.67
BRD9-203ENST00000475706 TSFMP43897 325 aaKnown RBP10.84□□□□□ -0.67
BRD9-203ENST00000475706 HNRNPH2P55795 449 aaKnown RBP10.84□□□□□ -0.67
BRD9-203ENST00000475706 RASA2Q15283 850 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 CCDC153Q494R4 210 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 TCHHL1Q5QJ38 904 aaPredicted RBP10.84□□□□□ -0.67
BRD9-203ENST00000475706 ACER2Q5QJU3 275 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 H3F3CQ6NXT2 135 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 ZYG11AQ6WRX3 759 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 SH2D5Q6ZV89 423 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 GPRIN3Q6ZVF9 776 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 RPS19BP1Q86WX3 136 aaKnown RBP10.84□□□□□ -0.67
BRD9-203ENST00000475706 NUDT13Q86X67 352 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 BEST3Q8N1M1 668 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 TMEM132CQ8N3T6 1108 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 ZCCHC7Q8N3Z6 543 aaKnown RBP10.84□□□□□ -0.67
BRD9-203ENST00000475706 RIBC1Q8N443 379 aaPredicted RBP10.84□□□□□ -0.67
BRD9-203ENST00000475706 SLC5A8Q8N695 610 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 CDYL2Q8N8U2 506 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 NFAM1Q8NET5 270 aaPredicted RBP10.84□□□□□ -0.67
BRD9-203ENST00000475706 B3GNT7Q8NFL0 401 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 MYRIPQ8NFW9 859 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 SUN3Q8TAQ9 357 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 METTL6Q8TCB7 284 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 ELP5Q8TE02 316 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 THAP3Q8WTV1 239 aaPredicted RBP10.84□□□□□ -0.67
BRD9-203ENST00000475706 SREK1Q8WXA9 508 aaKnown RBP10.84□□□□□ -0.67
BRD9-203ENST00000475706 SNRNP40Q96DI7 357 aaKnown RBP10.84□□□□□ -0.67
BRD9-203ENST00000475706 CCDC126Q96EE4 140 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 SLC29A3Q9BZD2 475 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 IQCGQ9H095 443 aaKnown RBP10.84□□□□□ -0.67
BRD9-203ENST00000475706 RPF2Q9H7B2 306 aaKnown RBP10.84□□□□□ -0.67
BRD9-203ENST00000475706 WDR41Q9HAD4 459 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 ADAP2Q9NPF8 381 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 FARSBQ9NSD9 589 aaKnown RBP10.84□□□□□ -0.67
BRD9-203ENST00000475706 LYARQ9NX58 379 aaKnown RBP10.84□□□□□ -0.67
BRD9-203ENST00000475706 MS4A12Q9NXJ0 267 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 PSD3Q9NYI0 1048 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 TRPS1Q9UHF7 1281 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 PCDHGA10Q9Y5H3 936 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 CLDN16Q9Y5I7 305 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 CLCA3PQ9Y6N3 262 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 KALRNO60229 2985 aa10.84□□□□□ -0.67
BRD9-203ENST00000475706 HELZ2Q9BYK8 2649 aaKnown RBP10.84□□□□□ -0.67
BRD9-203ENST00000475706 DOPEY2Q9Y3R5 2298 aa10.83□□□□□ -0.68
BRD9-203ENST00000475706 NINQ8N4C6 2090 aa10.83□□□□□ -0.68
BRD9-203ENST00000475706 BSNQ9UPA5 3926 aa10.83□□□□□ -0.68
BRD9-203ENST00000475706 TRAV17A0A0B4J275 112 aa10.83□□□□□ -0.68
BRD9-203ENST00000475706 ARHGAP10A1A4S6 786 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms