RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 NSMCE4AQ9NXX6 385 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 WHRNQ9P202 907 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 YARS2Q9Y2Z4 477 aaKnown RBP6.52□□□□□ -1.37
HDAC3-207ENST00000475549 SCN3AQ9NY46 2000 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 CPAMD8Q8IZJ3 1885 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 ANKDD1BA6NHY2 528 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 C17orf105B2RV13 164 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 G3V3Y1 287 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 FCHO1O14526 889 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 CLGNO14967 610 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 FGF17O60258 216 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 CCNT2O60583 730 aaKnown RBP6.51□□□□□ -1.37
HDAC3-207ENST00000475549 GLSO94925 669 aaPredicted RBP6.51□□□□□ -1.37
HDAC3-207ENST00000475549 MLYCDO95822 493 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 TGFB1P01137 390 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 CELA3AP09093 270 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 COX6B1P14854 86 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 STMN1P16949 149 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 IGFBP2P18065 325 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 ATP5A1P25705 553 aaKnown RBP6.51□□□□□ -1.37
HDAC3-207ENST00000475549 GSTM2P28161 218 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 PTGS2P35354 604 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 PTGER4P35408 488 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 GP5P40197 560 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 SOX3P41225 446 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 PAFAH1B1P43034 410 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 MSH2P43246 934 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 SSR4P51571 173 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 SMSP52788 366 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 PLTPP55058 493 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 ATP6V0D1P61421 351 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 IGLV3-21P80748 117 aaPredicted RBP6.51□□□□□ -1.37
HDAC3-207ENST00000475549 IRF8Q02556 426 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 TFF3Q07654 80 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 C2orf54Q08AI8 447 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 FOXO1Q12778 655 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 BMPR2Q13873 1038 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 ELAVL1Q15717 326 aaKnown RBP6.51□□□□□ -1.37
HDAC3-207ENST00000475549 TBCCQ15814 346 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 GRTP1Q5TC63 336 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 TRIM40Q6P9F5 258 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 ADGRD1Q6QNK2 874 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 IL20RBQ6UXL0 311 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 HSDL2Q6YN16 418 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 ZGRF1Q86YA3 2104 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 LAS2Q8IYD9 372 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 CENPLQ8N0S6 344 aaPredicted RBP6.51□□□□□ -1.37
HDAC3-207ENST00000475549 CYP4Z2PQ8N1L4 340 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 TCAIMQ8N3R3 496 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 SNX31Q8N9S9 440 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 POGLUT1Q8NBL1 392 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 FAM98AQ8NCA5 519 aaKnown RBP6.51□□□□□ -1.37
HDAC3-207ENST00000475549 BBOF1Q8ND07 529 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 PSD4Q8NDX1 1056 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 OR7G3Q8NG95 312 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 FBXO25Q8TCJ0 367 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 FBF1Q8TES7 1133 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 DOK4Q8TEW6 326 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 ZNF721Q8TF20 911 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 PHF10Q8WUB8 498 aaKnown RBP6.51□□□□□ -1.37
HDAC3-207ENST00000475549 UCN3Q969E3 161 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 TMEM125Q96AQ2 219 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 PPWD1Q96BP3 646 aaKnown RBP6.51□□□□□ -1.37
HDAC3-207ENST00000475549 NXNL1Q96CM4 212 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 TSPAN17Q96FV3 270 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 SENP5Q96HI0 755 aaPredicted RBP6.51□□□□□ -1.37
HDAC3-207ENST00000475549 SCYL1Q96KG9 808 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 GPR78Q96P69 363 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 KCNC2Q96PR1 638 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 SPOCK3Q9BQ16 436 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 TBCDQ9BTW9 1192 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 EFCAB11Q9BUY7 163 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 ZNF717Q9BY31 904 aaPredicted RBP6.51□□□□□ -1.37
HDAC3-207ENST00000475549 UCK2Q9BZX2 261 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 OR8D2Q9GZM6 311 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 OR51B5Q9H339 312 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 ZDHHC11Q9H8X9 412 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 PROK2Q9HC23 129 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 LYRM4Q9HD34 91 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 ADAP2Q9NPF8 381 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 SEMA4BQ9NPR2 832 aaPredicted RBP6.51□□□□□ -1.37
HDAC3-207ENST00000475549 WWOXQ9NZC7 414 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 CD274Q9NZQ7 290 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 RNF14Q9UBS8 474 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 RNF112Q9ULX5 631 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 KLF13Q9Y2Y9 288 aaPredicted RBP6.51□□□□□ -1.37
HDAC3-207ENST00000475549 CLCA3PQ9Y6N3 262 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 AKAP9Q99996 3911 aa6.51□□□□□ -1.37
HDAC3-207ENST00000475549 MYO7BQ6PIF6 2116 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 FAM187AA6NFU0 413 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 LRRC14BA6NHZ5 514 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 FAM166BA8MTA8 275 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 UBXN8O00124 270 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 PRRG2O14669 202 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 TFECO14948 347 aaPredicted RBP6.5□□□□□ -1.37
HDAC3-207ENST00000475549 EIF3HO15372 352 aaKnown RBP eCLIP6.5□□□□□ -1.37
HDAC3-207ENST00000475549 KLK8O60259 260 aa6.5□□□□□ -1.37
HDAC3-207ENST00000475549 CDC40O60508 579 aaKnown RBP eCLIP6.5□□□□□ -1.37
HDAC3-207ENST00000475549 PRKRAO75569 313 aaKnown RBP6.5□□□□□ -1.37
HDAC3-207ENST00000475549 SCELO95171 688 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms