RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, human

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKS1B-206	ENST00000474215	NOL11	Q9H8H0	719 aa	Known RBP	10.45	□□□□□ -0.74
CKS1B-206	ENST00000474215	DMRT3	Q9NQL9	472 aa		10.45	□□□□□ -0.74
CKS1B-206	ENST00000474215	PSD3	Q9NYI0	1048 aa		10.45	□□□□□ -0.74
CKS1B-206	ENST00000474215	XPR1	Q9UBH6	696 aa		10.45	□□□□□ -0.74
CKS1B-206	ENST00000474215	RNF11	Q9Y3C5	154 aa		10.45	□□□□□ -0.74
CKS1B-206	ENST00000474215	CLCA3P	Q9Y6N3	262 aa		10.45	□□□□□ -0.74
CKS1B-206	ENST00000474215	SPACA6	W5XKT8	324 aa		10.45	□□□□□ -0.74
CKS1B-206	ENST00000474215	TRBV11-1	A0A0K0K1C0	115 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	WIPF3	A6NGB9	483 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	FOXE1	O00358	373 aa	Predicted RBP	10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	OR7A17	O14581	309 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	IFNA16	P05015	189 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	SP1	P08047	785 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	CD46	P15529	392 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	CPN2	P22792	545 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	TPP2	P29144	1249 aa	Predicted RBP	10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	TRHR	P34981	398 aa	Predicted RBP	10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	CLCN2	P51788	898 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	GPR143	P51810	404 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	NEK2	P51955	445 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	RPS13	P62277	151 aa	Known RBP	10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	PHEX	P78562	749 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	STX4	Q12846	297 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	CUL3	Q13618	768 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	SERTAD2	Q14140	314 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	SLC29A2	Q14542	456 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	ZRSR2	Q15696	482 aa	Known RBP	10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	ELAVL1	Q15717	326 aa	Known RBP	10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	ZNF468	Q5VIY5	522 aa	Predicted RBP	10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	GPR180	Q86V85	440 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	TMEM132C	Q8N3T6	1108 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	TMEM151A	Q8N4L1	468 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	EIF1AD	Q8N9N8	165 aa	Known RBP	10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	C7orf57	Q8NEG2	295 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	WDR20	Q8TBZ3	569 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	PTPMT1	Q8WUK0	201 aa	Predicted RBP	10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	VMP1	Q96GC9	406 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	C5orf34	Q96MH7	638 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	NTMT1	Q9BV86	223 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	SORBS1	Q9BX66	1292 aa	Known RBP	10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	TXLNGY	Q9BZA5	131 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	ADAP2	Q9NPF8	381 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	KLHL1	Q9NR64	748 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	MS4A12	Q9NXJ0	267 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	LRFN1	Q9P244	771 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	VTI1B	Q9UEU0	232 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	ERRFI1	Q9UJM3	462 aa	Predicted RBP	10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	PCTP	Q9UKL6	214 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	FBXW2	Q9UKT8	454 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	OSGIN2	Q9Y236	505 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	SLC5A6	Q9Y289	635 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	CNTRL	Q7Z7A1	2325 aa		10.44	□□□□□ -0.74
CKS1B-206	ENST00000474215	SCN2A	Q99250	2005 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	USP9Y	O00507	2555 aa	Predicted RBP	10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	MYOCOS	A0A1B0GUC4	107 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	PLPP1	O14494	284 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	FCHO1	O14526	889 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	LDB3	O75112	727 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	NEURL1	O76050	574 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	ZFAND5	O76080	213 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	SBK3	P0C264	359 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	GP1BB	P13224	206 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	TNNI3	P19429	210 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	TLX1	P31314	330 aa	Predicted RBP	10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	ARL1	P40616	181 aa	Predicted RBP	10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	CYB561	P49447	251 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	HLCS	P50747	726 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	TDGF1P3	P51864	188 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	CCNG1	P51959	295 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	TEX35	Q5T0J7	233 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	SLC25A25	Q6KCM7	469 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	LCA5	Q86VQ0	697 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	ZCCHC7	Q8N3Z6	543 aa	Known RBP	10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	TMEM178A	Q8NBL3	297 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	LRRN4CL	Q8ND94	238 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	MORN4	Q8NDC4	146 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	OR52B6	Q8NGF0	335 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	THAP3	Q8WTV1	239 aa	Predicted RBP	10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	TANK	Q92844	425 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	DAZL	Q92904	295 aa	Known RBP	10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	NCLN	Q969V3	563 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	ANKRD9	Q96BM1	317 aa	Predicted RBP	10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	MTFMT	Q96DP5	389 aa	Known RBP	10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	SCMH1	Q96GD3	660 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	NSUN5	Q96P11	429 aa	Known RBP	10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	CDK15	Q96Q40	435 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	CCDC77	Q9BR77	488 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	RPF2	Q9H7B2	306 aa	Known RBP	10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	DDX31	Q9H8H2	851 aa	Known RBP	10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	TRIM45	Q9H8W5	580 aa	Predicted RBP	10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	ZBTB26	Q9HCK0	441 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	FETUB	Q9UGM5	382 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	PHF11	Q9UIL8	331 aa		10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	ZNF223	Q9UK11	482 aa	Predicted RBP	10.43	□□□□□ -0.74
CKS1B-206	ENST00000474215	CPAMD8	Q8IZJ3	1885 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	ESPL1	Q14674	2120 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	PTPN13	Q12923	2485 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	IQANK1	A0A1B0GTG1	560 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	LRRTM2	O43300	516 aa		10.42	□□□□□ -0.74
CKS1B-206	ENST00000474215	PROM1	O43490	865 aa		10.42	□□□□□ -0.74

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