RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 C7orf57Q8NEG2 295 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 C8orf44Q96CB5 159 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 UBL7Q96S82 380 aaPredicted RBP19.54■□□□□ 0.72
TOP3A-204ENST00000472959 ZNF700Q9H0M5 742 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 ATP13A2Q9NQ11 1180 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.54■□□□□ 0.72
TOP3A-204ENST00000472959 ASB4Q9Y574 426 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 DNAJC15Q9Y5T4 150 aa19.54■□□□□ 0.72
TOP3A-204ENST00000472959 IGKV3D-11A0A0A0MRZ8 115 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 IGHV1-45A0A0A0MS14 117 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 SLC28A1O00337 649 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 PROM1O43490 865 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 CTNSO60931 367 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 GUCY1B2O75343 617 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 RSL1D1O76021 490 aaKnown RBP19.53■□□□□ 0.72
TOP3A-204ENST00000472959 COX6A1P12074 109 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 TPP2P29144 1249 aaPredicted RBP19.53■□□□□ 0.72
TOP3A-204ENST00000472959 BUD31P41223 144 aaPredicted RBP19.53■□□□□ 0.72
TOP3A-204ENST00000472959 SLC1A6P48664 564 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 POLE2P56282 527 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 HMGCS1Q01581 520 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 ACSM2AQ08AH3 577 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 AIMP2Q13155 320 aaKnown RBP19.53■□□□□ 0.72
TOP3A-204ENST00000472959 SLC13A2Q13183 592 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 UGT3A2Q3SY77 523 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 CES4AQ5XG92 561 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 ACSM2BQ68CK6 577 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 SCUBE1Q8IWY4 988 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 C1orf52Q8N6N3 182 aaKnown RBP19.53■□□□□ 0.72
TOP3A-204ENST00000472959 EFCAB3Q8N7B9 438 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 RAB3IL1Q8TBN0 382 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 METTL2AQ96IZ6 378 aaKnown RBP19.53■□□□□ 0.72
TOP3A-204ENST00000472959 CSF3RQ99062 836 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 ILKAPQ9H0C8 392 aaPredicted RBP19.53■□□□□ 0.72
TOP3A-204ENST00000472959 ADNPQ9H2P0 1102 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 RIC8BQ9NVN3 520 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 SIRT5Q9NXA8 310 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 FIS1Q9Y3D6 152 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 ATG4BQ9Y4P1 393 aa19.53■□□□□ 0.72
TOP3A-204ENST00000472959 NSG1A0A0A6YYJ2 146 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 RGS14O43566 566 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 ITM2AO43736 263 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 GBAP04062 536 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 MAOAP21397 527 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 MAPK12P53778 367 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 HNRNPH2P55795 449 aaKnown RBP19.52■□□□□ 0.72
TOP3A-204ENST00000472959 SOX8P57073 446 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 TNFRSF17Q02223 184 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 EEF1A2Q05639 463 aaKnown RBP19.52■□□□□ 0.72
TOP3A-204ENST00000472959 ACTN3Q08043 901 aaPredicted RBP19.52■□□□□ 0.72
TOP3A-204ENST00000472959 SPDYAQ5MJ70 313 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 CPZQ66K79 652 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 GALNT18Q6P9A2 607 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 LANCL3Q6ZV70 420 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 LSM14AQ8ND56 463 aaKnown RBP19.52■□□□□ 0.72
TOP3A-204ENST00000472959 TMEM52Q8NDY8 209 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 TANKQ92844 425 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 TSLPQ969D9 159 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 CCT7Q99832 543 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 MESP1Q9BRJ9 268 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 TUBB6Q9BUF5 446 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 RPF2Q9H7B2 306 aaKnown RBP19.52■□□□□ 0.72
TOP3A-204ENST00000472959 WDR41Q9HAD4 459 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 PFDN4Q9NQP4 134 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 ZDHHC2Q9UIJ5 367 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 MCM8Q9UJA3 840 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 TUBD1Q9UJT1 453 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 RAP2CQ9Y3L5 183 aa19.52■□□□□ 0.72
TOP3A-204ENST00000472959 MGAQ8IWI9 3026 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 A0A1W2PR48 441 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 TCRBV16S1A1N1A0A5B0 115 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 TMEM233B4DJY2 109 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 NPIPB8E9PQR5 432 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 NR2F6P10588 404 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 SFTPCP11686 197 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 ICAM2P13598 275 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 PRPH2P23942 346 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 PPP2R1BP30154 601 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 HNRNPFP52597 415 aaKnown RBP19.51■□□□□ 0.71
TOP3A-204ENST00000472959 OR4D2P58180 307 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 TRA2BP62995 288 aaKnown RBP19.51■□□□□ 0.71
TOP3A-204ENST00000472959 BST1Q10588 318 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 CHAF1BQ13112 559 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 PCOLCEQ15113 449 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 SFT2D3Q587I9 215 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 ATG16L1Q676U5 607 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 ATG14Q6ZNE5 492 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 FAM76AQ8TAV0 307 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 TWIST2Q8WVJ9 160 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 C11orf24Q96F05 449 aaPredicted RBP19.51■□□□□ 0.71
TOP3A-204ENST00000472959 APIPQ96GX9 242 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 TRIM55Q9BYV6 548 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 TUBB1Q9H4B7 451 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 NECTIN3Q9NQS3 549 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 CCL27Q9Y4X3 112 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 CCDC88CQ9P219 2028 aa19.51■□□□□ 0.71
TOP3A-204ENST00000472959 MKRN2OSH3BPM6 223 aa19.5■□□□□ 0.71
TOP3A-204ENST00000472959 KLHL41O60662 606 aa19.5■□□□□ 0.71
TOP3A-204ENST00000472959 LYPLA1O75608 230 aaPredicted RBP19.5■□□□□ 0.71
TOP3A-204ENST00000472959 CEACAM4O75871 244 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms