RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 MAN2C1Q9NTJ4 1040 aa12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ITGB1BP2Q9UKP3 347 aa12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 GPR34Q9UPC5 381 aa12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ANKRD28O15084 1053 aa12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CA12O43570 354 aa12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 GALTP07902 379 aa12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 H2BFMP0C1H6 154 aa12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PAX6P26367 422 aa12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TSTQ16762 297 aaKnown RBP12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 BRAT1Q6PJG6 821 aa12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 LIPHQ8WWY8 451 aa12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TRPM6Q9BX84 2022 aa12.77□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 UPK3BL1B0FP48 263 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 UPK3BL2E5RIL1 263 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SOCS2O14508 198 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 RNGTTO60942 597 aaKnown RBP12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ATE1O95260 518 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 HMGN1P05114 100 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ADAM15Q13444 863 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 DCDC5Q6ZRR9 648 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SVOPLQ8N434 492 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 OR4C15Q8NGM1 316 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 CNOT9Q92600 299 aaKnown RBP12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 HAPLN3Q96S86 360 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TPSD1Q9BZJ3 242 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 GNB4Q9HAV0 340 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 CNTN6Q9UQ52 1028 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 LOC730098B7Z3J9 87 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ACOX3O15254 700 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 DNAJA2O60884 412 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 CDRT1O95170 752 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 JUNDP17535 347 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 OGDHQ02218 1023 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PTPRCAPQ14761 206 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 AAK1Q2M2I8 961 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ANKDD1AQ495B1 522 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 GPR157Q5UAW9 335 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 RNF130Q86XS8 419 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 HNRNPABQ99729 332 aaKnown RBP12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SYT4Q9H2B2 425 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 OR2S2Q9NQN1 319 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 B4GALT7Q9UBV7 327 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ACAD8Q9UKU7 415 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PEX16Q9Y5Y5 336 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 GGT3PA6NGU5 568 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 FSCN2O14926 492 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PRLP01236 227 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 RAP2AP10114 183 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 AQP4P55087 323 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 KIAA2026Q5HYC2 2103 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TPRG1LQ5T0D9 272 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ZNF619Q8N2I2 560 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 C17orf50Q8WW18 174 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 DTLQ9NZJ0 730 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PPP4R1LQ9P1A2 415 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 CKAP5Q14008 2032 aa12.77□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 M0QX08 132 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ENTPD6O75354 484 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 GLSO94925 669 aaPredicted RBP12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 AGR2O95994 175 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 FBLP22087 321 aaKnown RBP12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 MAGEA8P43361 318 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ZNF136P52737 540 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 EEFSECP57772 596 aaKnown RBP12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PROKR1Q8TCW9 393 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SAP130Q9H0E3 1048 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 GCM1Q9NP62 436 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 NRXN1Q9ULB1 1477 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 A0A0A6YYH2 397 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 LOC102723532A0A0G2JNH3 316 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 A6NJ64 397 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 C6orf47O95873 294 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ADORA3P0DMS8 318 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 RPL7P18124 248 aaKnown RBP12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 POU3F4P49335 361 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 LBX2Q6XYB7 198 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 OR10T2Q8NGX3 314 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 EIF5A2Q9GZV4 153 aaKnown RBP12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SRA1Q9HD15 236 aaKnown RBP12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 EMC3Q9P0I2 261 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 MPDZO75970 2070 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 RBM47A0AV96 593 aaKnown RBP12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 HERVK_113P63132 956 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 MYLK3Q32MK0 819 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TRIB2Q92519 343 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TSSK6Q9BXA6 273 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ERVK-6Q9BXR3 956 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 B3GALT1Q9Y5Z6 326 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 B4GAT1O43505 415 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TNFSF4P23510 183 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 RPL13AP40429 203 aaKnown RBP12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TMEM69Q5SWH9 247 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 CNKSR3Q6P9H4 555 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 HAGHLQ6PII5 290 aaPredicted RBP12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 GLB1L3Q8NCI6 653 aaPredicted RBP12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 C12orf43Q96C57 262 aaKnown RBP12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TFPTP0C1Z6 253 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 S100A7P31151 101 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 RNF4P78317 190 aa12.76□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ST3GAL3Q11203 375 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms