RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 BPGMP07738 259 aa14.35□□□□□ -0.11
SDC3-203ENST00000471567 MAOAP21397 527 aa14.35□□□□□ -0.11
SDC3-203ENST00000471567 CPN2P22792 545 aa14.35□□□□□ -0.11
SDC3-203ENST00000471567 TLX1P31314 330 aaPredicted RBP14.35□□□□□ -0.11
SDC3-203ENST00000471567 SERPINB5P36952 375 aa14.35□□□□□ -0.11
SDC3-203ENST00000471567 GALNT1Q10472 559 aaPredicted RBP14.35□□□□□ -0.11
SDC3-203ENST00000471567 SLC13A2Q13183 592 aa14.35□□□□□ -0.11
SDC3-203ENST00000471567 EXT1Q16394 746 aa14.35□□□□□ -0.11
SDC3-203ENST00000471567 TCHHL1Q5QJ38 904 aaPredicted RBP14.35□□□□□ -0.11
SDC3-203ENST00000471567 PLAG1Q6DJT9 500 aa14.35□□□□□ -0.11
SDC3-203ENST00000471567 JMJD6Q6NYC1 403 aaPredicted RBP14.35□□□□□ -0.11
SDC3-203ENST00000471567 CYP20A1Q6UW02 462 aa14.35□□□□□ -0.11
SDC3-203ENST00000471567 ASB18Q6ZVZ8 466 aa14.35□□□□□ -0.11
SDC3-203ENST00000471567 FAM47BQ8NA70 645 aa14.35□□□□□ -0.11
SDC3-203ENST00000471567 TMEM52Q8NDY8 209 aa14.35□□□□□ -0.11
SDC3-203ENST00000471567 THOC3Q96J01 351 aaKnown RBP14.35□□□□□ -0.11
SDC3-203ENST00000471567 CSF3RQ99062 836 aa14.35□□□□□ -0.11
SDC3-203ENST00000471567 WDR77Q9BQA1 342 aaPredicted RBP14.35□□□□□ -0.11
SDC3-203ENST00000471567 ZNF552Q9H707 407 aaPredicted RBP14.35□□□□□ -0.11
SDC3-203ENST00000471567 NECTIN3Q9NQS3 549 aa14.35□□□□□ -0.11
SDC3-203ENST00000471567 ZNF71Q9NQZ8 489 aaPredicted RBP14.35□□□□□ -0.11
SDC3-203ENST00000471567 VPS29Q9UBQ0 182 aa14.35□□□□□ -0.11
SDC3-203ENST00000471567 FBXW2Q9UKT8 454 aa14.35□□□□□ -0.11
SDC3-203ENST00000471567 TIMM22Q9Y584 194 aa14.35□□□□□ -0.11
SDC3-203ENST00000471567 IGHV3-20A0A0C4DH32 117 aa14.34□□□□□ -0.11
SDC3-203ENST00000471567 PROM1O43490 865 aa14.34□□□□□ -0.11
SDC3-203ENST00000471567 CRCPO75575 148 aa14.34□□□□□ -0.11
SDC3-203ENST00000471567 SEC24DO94855 1032 aaPredicted RBP14.34□□□□□ -0.11
SDC3-203ENST00000471567 ZWINTO95229 277 aa14.34□□□□□ -0.11
SDC3-203ENST00000471567 FAM58BPP0C7Q3 252 aa14.34□□□□□ -0.11
SDC3-203ENST00000471567 PRR35P0CG20 571 aa14.34□□□□□ -0.11
SDC3-203ENST00000471567 UROSP10746 265 aa14.34□□□□□ -0.11
SDC3-203ENST00000471567 HNRNPFP52597 415 aaKnown RBP14.34□□□□□ -0.11
SDC3-203ENST00000471567 TBL3Q12788 808 aaKnown RBP14.34□□□□□ -0.11
SDC3-203ENST00000471567 BIKQ13323 160 aa14.34□□□□□ -0.11
SDC3-203ENST00000471567 AGAP7PQ5VUJ5 663 aa14.34□□□□□ -0.11
SDC3-203ENST00000471567 PAPD4Q6PIY7 484 aaKnown RBP14.34□□□□□ -0.11
SDC3-203ENST00000471567 EFCAB3Q8N7B9 438 aa14.34□□□□□ -0.11
SDC3-203ENST00000471567 M1APQ8TC57 530 aa14.34□□□□□ -0.11
SDC3-203ENST00000471567 AGAP4Q96P64 663 aa14.34□□□□□ -0.11
SDC3-203ENST00000471567 KCNA7Q96RP8 456 aa14.34□□□□□ -0.11
SDC3-203ENST00000471567 MECRQ9BV79 373 aa14.34□□□□□ -0.11
SDC3-203ENST00000471567 MRPL1Q9BYD6 325 aaKnown RBP14.34□□□□□ -0.11
SDC3-203ENST00000471567 TMBIM4Q9HC24 238 aa14.34□□□□□ -0.11
SDC3-203ENST00000471567 EML4Q9HC35 981 aaKnown RBP14.34□□□□□ -0.11
SDC3-203ENST00000471567 ATG4BQ9Y4P1 393 aa14.34□□□□□ -0.11
SDC3-203ENST00000471567 ASB4Q9Y574 426 aa14.34□□□□□ -0.11
SDC3-203ENST00000471567 CLDN16Q9Y5I7 305 aa14.34□□□□□ -0.11
SDC3-203ENST00000471567 COL6A6A6NMZ7 2263 aa14.34□□□□□ -0.11
SDC3-203ENST00000471567 TLN1Q9Y490 2541 aaKnown RBP14.34□□□□□ -0.11
SDC3-203ENST00000471567 SCN2AQ99250 2005 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 ARHGAP10A1A4S6 786 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 K7EM74 188 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 BIRC5O15392 142 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 TMPRSS11DO60235 418 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 PDGFAP04085 211 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 PRB1P04280 392 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 KLK1P06870 262 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 FGF4P08620 206 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 DHRS4L1P0CG22 281 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 H2AFXP16104 143 aaPredicted RBP14.33□□□□□ -0.12
SDC3-203ENST00000471567 TPP2P29144 1249 aaPredicted RBP14.33□□□□□ -0.12
SDC3-203ENST00000471567 PPP2R1BP30154 601 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 BUD31P41223 144 aaPredicted RBP14.33□□□□□ -0.12
SDC3-203ENST00000471567 SERPINB4P48594 390 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 HTR6P50406 440 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 FOXA1P55317 472 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 HNRNPH2P55795 449 aaKnown RBP14.33□□□□□ -0.12
SDC3-203ENST00000471567 TNFRSF17Q02223 184 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 NFATC3Q12968 1075 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 RAPSNQ13702 412 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 SERTAD2Q14140 314 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 TERF2Q15554 542 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 CCNYL2Q5T2Q4 361 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 IGFL3Q6UXB1 125 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 COMMD6Q7Z4G1 85 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 CUZD1Q86UP6 607 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 NUDCD3Q8IVD9 361 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 ZNF843Q8N446 348 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 OR6Y1Q8NGX8 325 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 CHTF18Q8WVB6 975 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 TANKQ92844 425 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 PKNOX2Q96KN3 472 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 HBEGFQ99075 208 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 ACPTQ9BZG2 426 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 RPF2Q9H7B2 306 aaKnown RBP14.33□□□□□ -0.12
SDC3-203ENST00000471567 WDR41Q9HAD4 459 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 KCNK9Q9NPC2 374 aa14.33□□□□□ -0.12
SDC3-203ENST00000471567 AZIN1O14977 448 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 DPM1O60762 260 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 GUCY1B2O75343 617 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 C1QL1O75973 258 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 NR1D1P20393 614 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 SLC18A1P54219 525 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 SLC26A5P58743 744 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 TRA2BP62995 288 aaKnown RBP14.32□□□□□ -0.12
SDC3-203ENST00000471567 C19orf57Q0VDD7 668 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 STX4Q12846 297 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 KLRB1Q12918 225 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 BTBD16Q32M84 506 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms