RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 C10orf111Q8N326 155 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 ARHGEF39Q8N4T4 335 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 DNAJC22Q8N4W6 341 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 OR6C4Q8NGE1 309 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 OR4C6Q8NH72 309 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 ZFP28Q8NHY6 868 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 PSMA8Q8TAA3 256 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 ZCCHC10Q8TBK6 192 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 SAP25Q8TEE9 199 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 NRG4Q8WWG1 115 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 KLHL6Q8WZ60 621 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 EXOSC8Q96B26 276 aaKnown RBP8.89□□□□□ -0.99
VPS52-216ENST00000471309 FAM122AQ96E09 287 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 ZBED6CLQ96FA7 236 aaPredicted RBP8.89□□□□□ -0.99
VPS52-216ENST00000471309 NSMCE2Q96MF7 247 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 MAP3K3Q99759 626 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 CCDC3Q9BQI4 270 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 SLC35A5Q9BS91 424 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 EFHD1Q9BUP0 239 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 TRIM4Q9C037 500 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 ZMYND15Q9H091 742 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 CHST8Q9H2A9 424 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 RAD21L1Q9H4I0 556 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 RPF2Q9H7B2 306 aaKnown RBP8.89□□□□□ -0.99
VPS52-216ENST00000471309 CAPN10Q9HC96 672 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 FAM60AQ9NP50 221 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 SLAMF7Q9NQ25 335 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 ARMC1Q9NVT9 282 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 MS4A12Q9NXJ0 267 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 RIMS3Q9UJD0 308 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 UTS2RQ9UKP6 389 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 ATG4BQ9Y4P1 393 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 AP4S1Q9Y587 144 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 SLC22A7Q9Y694 548 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 MUC3AQ02505 3323 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 ADAMTS20P59510 1910 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 RNF103-CHMP3A0A140T963 221 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 CXCR6O00574 342 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 PROM1O43490 865 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 GALR3O60755 368 aaPredicted RBP8.88□□□□□ -0.99
VPS52-216ENST00000471309 KRT75O95678 551 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 BAG2O95816 211 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 C9P02748 559 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 CFIP05156 583 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 EIF2S1P05198 315 aaKnown RBP8.88□□□□□ -0.99
VPS52-216ENST00000471309 RETP07949 1114 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 IL1RNP18510 177 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 UQCRC2P22695 453 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 NTSP30990 170 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 BUD31P41223 144 aaPredicted RBP8.88□□□□□ -0.99
VPS52-216ENST00000471309 MLLT3P42568 568 aaPredicted RBP8.88□□□□□ -0.99
VPS52-216ENST00000471309 CCT8P50990 548 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 MVDP53602 400 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 GFERP55789 205 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 VSX2P58304 361 aaPredicted RBP8.88□□□□□ -0.99
VPS52-216ENST00000471309 SNRPNP63162 240 aaKnown RBP8.88□□□□□ -0.99
VPS52-216ENST00000471309 VAC14Q08AM6 782 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 FADDQ13158 208 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 CEBPEQ15744 281 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 VMACQ2NL98 169 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 PRTGQ2VWP7 1150 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 DEFB134Q4QY38 66 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 OR52E8Q6IFG1 317 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 NIPAL1Q6NVV3 410 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 ZNF551Q7Z340 670 aaPredicted RBP8.88□□□□□ -0.99
VPS52-216ENST00000471309 DGLUCYQ7Z3D6 616 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 MCATQ8IVS2 390 aaKnown RBP8.88□□□□□ -0.99
VPS52-216ENST00000471309 ZZZ3Q8IYH5 903 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 ADGRG5Q8IZF4 528 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 PAPD5Q8NDF8 572 aaKnown RBP8.88□□□□□ -0.99
VPS52-216ENST00000471309 OR52N2Q8NGI0 321 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 SLCO4A1Q96BD0 722 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 ZNF285Q96NJ3 590 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 TGM7Q96PF1 710 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 MAPKAP1Q9BPZ7 522 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 NPLQ9BXD5 320 aaPredicted RBP8.88□□□□□ -0.99
VPS52-216ENST00000471309 PIF1Q9H611 641 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 EPS8L2Q9H6S3 715 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 CXorf36Q9H7Y0 433 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 LYRM4Q9HD34 91 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 SLC35C2Q9NQQ7 365 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 ENAMQ9NRM1 1142 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 CCM2LQ9NUG4 571 aaPredicted RBP8.88□□□□□ -0.99
VPS52-216ENST00000471309 SEMA5BQ9P283 1151 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 ANAPC2Q9UJX6 822 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 FBXW2Q9UKT8 454 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 CES1P1Q9UKY3 287 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 PADI4Q9UM07 663 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 DAPP1Q9UN19 280 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 PLCL2Q9UPR0 1127 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 ENTPD4Q9Y227 616 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 MRPS2Q9Y399 296 aaKnown RBP8.88□□□□□ -0.99
VPS52-216ENST00000471309 SPACA6W5XKT8 324 aa8.88□□□□□ -0.99
VPS52-216ENST00000471309 CACNA1IQ9P0X4 2223 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 IGHV5-51A0A0C4DH38 117 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 MYO1GB0I1T2 1018 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 HCRTR1O43613 425 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 KIF1CO43896 1103 aaKnown RBP8.87□□□□□ -0.99
VPS52-216ENST00000471309 PRKRAO75569 313 aaKnown RBP8.87□□□□□ -0.99
VPS52-216ENST00000471309 KCNK5O95279 499 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms