RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 TAS2R50P59544 299 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 CLN3Q13286 438 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 HEPACAMQ14CZ8 416 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 TGIF1Q15583 401 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 VWA2Q5GFL6 755 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 IL23RQ5VWK5 629 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 ZNF595Q8IYB9 648 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 TMEM132CQ8N3T6 1108 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 ENDOVQ8N8Q3 282 aaKnown RBP14.34□□□□□ -0.11
SNIP1-202ENST00000468040 FAM47BQ8NA70 645 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 RFWD2Q8NHY2 731 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 C16orf78Q8WTQ4 265 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 TM4SF18Q96CE8 201 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 OR52B2Q96RD2 323 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 EBF4Q9BQW3 602 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 C1orf50Q9BV19 199 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 TMEM121BQ9BXQ6 578 aaPredicted RBP14.34□□□□□ -0.11
SNIP1-202ENST00000468040 RBCK1Q9BYM8 510 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 DPH1Q9BZG8 443 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 MYNNQ9NPC7 610 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 KLHL14Q9P2G3 628 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 DLGAP4Q9Y2H0 992 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 PCDHGA6Q9Y5G7 932 aa14.34□□□□□ -0.11
SNIP1-202ENST00000468040 LOC101059948A0A1B0GTJ6 334 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 C1orf226A1L170 272 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 SRRM3A6NNA2 597 aaPredicted RBP14.33□□□□□ -0.12
SNIP1-202ENST00000468040 TERTO14746 1132 aaKnown RBP14.33□□□□□ -0.12
SNIP1-202ENST00000468040 B4GALT2O60909 372 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 KLF7O75840 302 aaPredicted RBP14.33□□□□□ -0.12
SNIP1-202ENST00000468040 AIFM1O95831 613 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 DRD2P14416 443 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 FOLR3P41439 243 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 HSD17B7P56937 341 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 KLC1Q07866 573 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 LSM12Q3MHD2 195 aaKnown RBP14.33□□□□□ -0.12
SNIP1-202ENST00000468040 MINDY4Q4G0A6 757 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 NDUFAF5Q5TEU4 345 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 MFSD4BQ5TF39 518 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 CGB2Q6NT52 195 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 UNQ6494/PRO21346Q6UXR6 183 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 CPLX4Q7Z7G2 160 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 LIX1Q8N485 282 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 C7orf57Q8NEG2 295 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 OR2Y1Q8NGV0 311 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 CDC26Q8NHZ8 85 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 TANKQ92844 425 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 CSF3RQ99062 836 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 SPSB2Q99619 263 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 RPF2Q9H7B2 306 aaKnown RBP14.33□□□□□ -0.12
SNIP1-202ENST00000468040 LANCL2Q9NS86 450 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 TEX10Q9NXF1 929 aaPredicted RBP14.33□□□□□ -0.12
SNIP1-202ENST00000468040 TCFL5Q9UL49 500 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 FARSAQ9Y285 508 aaKnown RBP14.33□□□□□ -0.12
SNIP1-202ENST00000468040 PTRH2Q9Y3E5 179 aaKnown RBP14.33□□□□□ -0.12
SNIP1-202ENST00000468040 MMACHCQ9Y4U1 282 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 SEC16AO15027 2179 aa14.33□□□□□ -0.12
SNIP1-202ENST00000468040 SYNDIG1LA6NDD5 238 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 FAM227AF5H4B4 570 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 TLX3O43711 291 aaPredicted RBP14.32□□□□□ -0.12
SNIP1-202ENST00000468040 SHOX2O60902 331 aaPredicted RBP14.32□□□□□ -0.12
SNIP1-202ENST00000468040 CNOT3O75175 753 aaKnown RBP14.32□□□□□ -0.12
SNIP1-202ENST00000468040 JRKO75564 520 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 CDC123O75794 336 aaPredicted RBP14.32□□□□□ -0.12
SNIP1-202ENST00000468040 IL3P08700 152 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 IDO1P14902 403 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 TACR1P25103 407 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 PPP2R1BP30154 601 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 ARFIP2P53365 341 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 IRX1P78414 480 aaPredicted RBP14.32□□□□□ -0.12
SNIP1-202ENST00000468040 C18orf63Q68DL7 685 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 OR52E8Q6IFG1 317 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 QSOX2Q6ZRP7 698 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 PRSS58Q8IYP2 241 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.32□□□□□ -0.12
SNIP1-202ENST00000468040 RILPQ96NA2 401 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 TSSK3Q96PN8 268 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 CRB3Q9BUF7 120 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 TMEM120AQ9BXJ8 343 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 FAM107BQ9H098 131 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 EPN3Q9H201 632 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 ACTL8Q9H568 366 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 SOX17Q9H6I2 414 aaPredicted RBP14.32□□□□□ -0.12
SNIP1-202ENST00000468040 KCNK13Q9HB14 408 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 PRTFDC1Q9NRG1 225 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 SEMA3GQ9NS98 782 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 AIG1Q9NVV5 245 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 WDR70Q9NW82 654 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 EHD3Q9NZN3 535 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 MKL2Q9ULH7 1088 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 TRIM33Q9UPN9 1127 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 MAPRE3Q9UPY8 281 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 PCDHA9Q9Y5H5 950 aa14.32□□□□□ -0.12
SNIP1-202ENST00000468040 IDSB3KWA1 339 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 PCDH17O14917 1159 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 UBDO15205 165 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 RRP8O43159 456 aaKnown RBP14.31□□□□□ -0.12
SNIP1-202ENST00000468040 PRMT3O60678 531 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 CTNSO60931 367 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 IGHEP01854 428 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 CAPNS1P04632 268 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms