RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 STMN1P16949 149 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 TGM3Q08188 693 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 STX4Q12846 297 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 ARHGAP11AQ6P4F7 1023 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 GPALPP1Q8IXQ4 340 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 ZNF321PQ8N8H1 164 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 OR2M7Q8NG81 312 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 PTPMT1Q8WUK0 201 aaPredicted RBP19.56■□□□□ 0.72
COL9A3-207ENST00000467819 CDKL2Q92772 493 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 DAZLQ92904 295 aaKnown RBP19.56■□□□□ 0.72
COL9A3-207ENST00000467819 RASL10BQ96S79 203 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 EFCAB11Q9BUY7 163 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 ALOXE3Q9BYJ1 711 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 OR8D2Q9GZM6 311 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 ENKD1Q9H0I2 346 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 DPH5Q9H2P9 285 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 PRDM7Q9NQW5 492 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 PLSCR2Q9NRY7 297 aa19.56■□□□□ 0.72
COL9A3-207ENST00000467819 C2CD3Q4AC94 2353 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 SYNDIG1LA6NDD5 238 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 LDB3O75112 727 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 SH3BGRLO75368 114 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 S100BP04271 92 aaPredicted RBP19.55■□□□□ 0.72
COL9A3-207ENST00000467819 TNNI3P19429 210 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 GMPRP36959 345 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 KCNC1P48547 511 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 HK2P52789 917 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 ATP6V0D1P61421 351 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 PPIAP62937 165 aaKnown RBP19.55■□□□□ 0.72
COL9A3-207ENST00000467819 ID2Q02363 134 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 IRF8Q02556 426 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 TLE4Q04727 773 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 ILF2Q12905 390 aaKnown RBP19.55■□□□□ 0.72
COL9A3-207ENST00000467819 EFTUD2Q15029 972 aaKnown RBP eCLIP19.55■□□□□ 0.72
COL9A3-207ENST00000467819 HIST2H2ACQ16777 129 aaPredicted RBP19.55■□□□□ 0.72
COL9A3-207ENST00000467819 CDKL4Q5MAI5 379 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 HIST2H2AA3Q6FI13 130 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 TMEM211Q6ICI0 200 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 ZNF793Q6ZN11 406 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 RPRMLQ8N4K4 120 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 PDPRQ8NCN5 879 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 OR14A16Q8NHC5 309 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 WDR34Q96EX3 536 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 C14orf79Q96F83 325 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 KCNC2Q96PR1 638 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 GPR22Q99680 433 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 RBBP8Q99708 897 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 TP63Q9H3D4 680 aaPredicted RBP19.55■□□□□ 0.72
COL9A3-207ENST00000467819 PTBP2Q9UKA9 531 aaKnown RBP19.55■□□□□ 0.72
COL9A3-207ENST00000467819 RNF112Q9ULX5 631 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 MED13LQ71F56 2210 aa19.55■□□□□ 0.72
COL9A3-207ENST00000467819 FAM90A27PA6NNH2 459 aa19.54■□□□□ 0.72
COL9A3-207ENST00000467819 C17orf105B2RV13 164 aa19.54■□□□□ 0.72
COL9A3-207ENST00000467819 ACOT7O00154 380 aa19.54■□□□□ 0.72
COL9A3-207ENST00000467819 RTCAO00442 366 aaKnown RBP19.54■□□□□ 0.72
COL9A3-207ENST00000467819 EPORP19235 508 aa19.54■□□□□ 0.72
COL9A3-207ENST00000467819 MSH2P43246 934 aa19.54■□□□□ 0.72
COL9A3-207ENST00000467819 CHIT1Q13231 466 aa19.54■□□□□ 0.72
COL9A3-207ENST00000467819 LAPTM5Q13571 262 aa19.54■□□□□ 0.72
COL9A3-207ENST00000467819 ZNF750Q32MQ0 723 aa19.54■□□□□ 0.72
COL9A3-207ENST00000467819 PAGE2BQ5JRK9 111 aa19.54■□□□□ 0.72
COL9A3-207ENST00000467819 ACBD4Q8NC06 268 aa19.54■□□□□ 0.72
COL9A3-207ENST00000467819 BBOF1Q8ND07 529 aa19.54■□□□□ 0.72
COL9A3-207ENST00000467819 MORN4Q8NDC4 146 aa19.54■□□□□ 0.72
COL9A3-207ENST00000467819 ASB5Q8WWX0 329 aa19.54■□□□□ 0.72
COL9A3-207ENST00000467819 KIAA1191Q96A73 305 aa19.54■□□□□ 0.72
COL9A3-207ENST00000467819 CPNE1Q99829 537 aa19.54■□□□□ 0.72
COL9A3-207ENST00000467819 MAPKAP1Q9BPZ7 522 aa19.54■□□□□ 0.72
COL9A3-207ENST00000467819 GRPEL1Q9HAV7 217 aa19.54■□□□□ 0.72
COL9A3-207ENST00000467819 LYRM4Q9HD34 91 aa19.54■□□□□ 0.72
COL9A3-207ENST00000467819 VTI1BQ9UEU0 232 aa19.54■□□□□ 0.72
COL9A3-207ENST00000467819 RNF6Q9Y252 685 aa19.54■□□□□ 0.72
COL9A3-207ENST00000467819 NKX2-6A6NCS4 301 aa19.53■□□□□ 0.72
COL9A3-207ENST00000467819 NPIPA2E9PIF3 369 aa19.53■□□□□ 0.72
COL9A3-207ENST00000467819 NPIPA3F8WFD2 350 aa19.53■□□□□ 0.72
COL9A3-207ENST00000467819 PCNAP12004 261 aa19.53■□□□□ 0.72
COL9A3-207ENST00000467819 GP5P40197 560 aa19.53■□□□□ 0.72
COL9A3-207ENST00000467819 CALCOCO2Q13137 446 aa19.53■□□□□ 0.72
COL9A3-207ENST00000467819 CBLBQ13191 982 aa19.53■□□□□ 0.72
COL9A3-207ENST00000467819 EMC4Q5J8M3 183 aa19.53■□□□□ 0.72
COL9A3-207ENST00000467819 PAOXQ6QHF9 649 aa19.53■□□□□ 0.72
COL9A3-207ENST00000467819 UBE3DQ7Z6J8 389 aa19.53■□□□□ 0.72
COL9A3-207ENST00000467819 ACOT4Q8N9L9 421 aa19.53■□□□□ 0.72
COL9A3-207ENST00000467819 SLC2A12Q8TD20 617 aa19.53■□□□□ 0.72
COL9A3-207ENST00000467819 RND1Q92730 232 aa19.53■□□□□ 0.72
COL9A3-207ENST00000467819 SCYL1Q96KG9 808 aa19.53■□□□□ 0.72
COL9A3-207ENST00000467819 MS4A8Q9BY19 250 aa19.53■□□□□ 0.72
COL9A3-207ENST00000467819 TTTY12Q9BZ98 90 aa19.53■□□□□ 0.72
COL9A3-207ENST00000467819 CD244Q9BZW8 370 aa19.53■□□□□ 0.72
COL9A3-207ENST00000467819 ROGDIQ9GZN7 287 aa19.53■□□□□ 0.72
COL9A3-207ENST00000467819 NCKAP5O14513 1909 aa19.53■□□□□ 0.72
COL9A3-207ENST00000467819 TCRBV9S1A1TA0A576 114 aa19.52■□□□□ 0.72
COL9A3-207ENST00000467819 ATP5A1P25705 553 aaKnown RBP19.52■□□□□ 0.72
COL9A3-207ENST00000467819 CHRNB4P30926 498 aa19.52■□□□□ 0.72
COL9A3-207ENST00000467819 RAB10P61026 200 aa19.52■□□□□ 0.72
COL9A3-207ENST00000467819 RNF4P78317 190 aa19.52■□□□□ 0.72
COL9A3-207ENST00000467819 SERTAD2Q14140 314 aa19.52■□□□□ 0.72
COL9A3-207ENST00000467819 ZKSCAN8Q15776 578 aaPredicted RBP19.52■□□□□ 0.72
COL9A3-207ENST00000467819 RTL4Q6ZR62 310 aa19.52■□□□□ 0.72
COL9A3-207ENST00000467819 GK5Q6ZS86 529 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms