RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 MISPQ8IVT2 679 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 GPALPP1Q8IXQ4 340 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 ZNF611Q8N823 705 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 RASGEF1AQ8N9B8 481 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 FADS6Q8N9I5 356 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 L3MBTL4Q8NA19 623 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 FAM71CQ8NEG0 241 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 BBS1Q8NFJ9 593 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 OR2T12Q8NG77 320 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 LILRB4Q8NHJ6 448 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 EXD1Q8NHP7 514 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 RNASE8Q8TDE3 154 aaKnown RBP3.41□□□□□ -1.86
VPS50-209ENST00000467326 SLC26A7Q8TE54 656 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 STARD8Q92502 1023 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 RIT1Q92963 219 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 NCLNQ969V3 563 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 SLC47A1Q96FL8 570 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 ZNF582Q96NG8 517 aaPredicted RBP3.41□□□□□ -1.86
VPS50-209ENST00000467326 PSKH2Q96QS6 385 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 SLC22A12Q96S37 553 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 COG4Q9H9E3 785 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 MAGEF1Q9HAY2 307 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 PARVGQ9HBI0 331 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 HPS4Q9NQG7 708 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 ZCCHC3Q9NUD5 404 aaKnown RBP3.41□□□□□ -1.86
VPS50-209ENST00000467326 PANK4Q9NVE7 773 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 HYPKQ9NX55 129 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 BARHL2Q9NY43 387 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 GTSE1Q9NYZ3 720 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 HBS1LQ9Y450 684 aaKnown RBP3.41□□□□□ -1.86
VPS50-209ENST00000467326 AP4B1Q9Y6B7 739 aa3.41□□□□□ -1.86
VPS50-209ENST00000467326 KANK1Q14678 1352 aa3.4□□□□□ -1.86
VPS50-209ENST00000467326 MACROD2A1Z1Q3 448 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 SLC15A5A6NIM6 579 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 PCP4L1A6NKN8 68 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 A8MUI8 341 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 HSBP1L1C9JCN9 74 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 HHLA1C9JL84 531 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 TRIM77I1YAP6 450 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 YKT6O15498 198 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 ZNF254O75437 659 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 OTCP00480 354 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 SERPINA3P01011 423 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 LDLRP01130 860 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 C9P02748 559 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 IVLP07476 585 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 SPP1P10451 314 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 CLUP10909 449 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 LIFP15018 202 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 CPA3P15088 417 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 TCF4P15884 667 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 GNB3P16520 340 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 CEBPBP17676 345 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 CBLP22681 906 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 NMBRP28336 390 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 MARCKSP29966 332 aaPredicted RBP3.4□□□□□ -1.87
VPS50-209ENST00000467326 OR1G1P47890 313 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 CEBPDP49716 269 aaPredicted RBP3.4□□□□□ -1.87
VPS50-209ENST00000467326 VEGFCP49767 419 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 ASCL1P50553 236 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 SUCLG1P53597 346 aaKnown RBP3.4□□□□□ -1.87
VPS50-209ENST00000467326 SSTP61278 116 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 HSF2Q03933 536 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 ARHGAP1Q07960 439 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 LCP2Q13094 533 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 PTCH1Q13635 1447 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 HNRNPDQ14103 355 aaKnown RBP3.4□□□□□ -1.87
VPS50-209ENST00000467326 CLPPQ16740 277 aaPredicted RBP3.4□□□□□ -1.87
VPS50-209ENST00000467326 C14orf177Q52M58 125 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 XKR3Q5GH77 459 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 LDLRAP1Q5SW96 308 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 FAM109BQ6ICB4 259 aaPredicted RBP3.4□□□□□ -1.87
VPS50-209ENST00000467326 ERICH5Q6P6B1 374 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 ZNF790Q6PG37 636 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 FAM198BQ6UWH4 519 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 DLEU7Q6UYE1 221 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 B3GLCTQ6Y288 498 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 SH2D5Q6ZV89 423 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 COMTD1Q86VU5 262 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 WDR49Q8IV35 697 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 FAM219AQ8IW50 185 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 RNF148Q8N7C7 305 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 OR52B4Q8NGK2 314 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 GOLGA5Q8TBA6 731 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 CKAP2Q8WWK9 683 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 SLCO4A1Q96BD0 722 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 PGM2Q96G03 612 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 ARL5BQ96KC2 179 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 RHNO1Q9BSD3 238 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 TSPYL1Q9H0U9 437 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 TMEM231Q9H6L2 316 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 SLA2Q9H6Q3 261 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 C8orf33Q9H7E9 229 aaPredicted RBP3.4□□□□□ -1.87
VPS50-209ENST00000467326 LMAN1LQ9HAT1 526 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 EQTNQ9NQ60 294 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 OLFML3Q9NRN5 406 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 ECHDC1Q9NTX5 307 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 TAS2R14Q9NYV8 317 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 KIAA1257Q9ULG3 409 aa3.4□□□□□ -1.87
VPS50-209ENST00000467326 KCNJ14Q9UNX9 436 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms