RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 KIAA1143Q96AT1 154 aaPredicted RBP14.32□□□□□ -0.12
NPHP4-205ENST00000466897 NACC2Q96BF6 587 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 MIEF2Q96C03 454 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 TM4SF18Q96CE8 201 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 RNF31Q96EP0 1072 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 ZNF764Q96H86 408 aaPredicted RBP14.32□□□□□ -0.12
NPHP4-205ENST00000466897 PEX11GQ96HA9 241 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 PPP1R36Q96LQ0 422 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 FAIM2Q9BWQ8 316 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 EBPLQ9BY08 206 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 NSRP1Q9H0G5 558 aaKnown RBP14.32□□□□□ -0.12
NPHP4-205ENST00000466897 WDR55Q9H6Y2 383 aaPredicted RBP14.32□□□□□ -0.12
NPHP4-205ENST00000466897 KCNK13Q9HB14 408 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 TCF7L2Q9NQB0 619 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 LANCL2Q9NS86 450 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 EHD3Q9NZN3 535 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 GIMAP2Q9UG22 337 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 DLGAP4Q9Y2H0 992 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 SSUH2Q9Y2M2 353 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 ATG4BQ9Y4P1 393 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 MMACHCQ9Y4U1 282 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 POLR3HQ9Y535 204 aaPredicted RBP14.32□□□□□ -0.12
NPHP4-205ENST00000466897 GOLGA8QA0A0J9YX86 632 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 LOC101059948A0A1B0GTJ6 334 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 A0A1W2PR48 441 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 C1orf226A1L170 272 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 GOLGA8OA6NCC3 632 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 TMEM8BA6NDV4 472 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 GOLGA8NF8WBI6 632 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 CLDN4O14493 209 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 TLX3O43711 291 aaPredicted RBP14.31□□□□□ -0.12
NPHP4-205ENST00000466897 CNOT3O75175 753 aaKnown RBP14.31□□□□□ -0.12
NPHP4-205ENST00000466897 DRD2P14416 443 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 CPN2P22792 545 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 PTPN4P29074 926 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 PPP2R1BP30154 601 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 DLSTP36957 453 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 HSD17B7P56937 341 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 C21orf58P58505 322 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 KLC1Q07866 573 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 LSM12Q3MHD2 195 aaKnown RBP14.31□□□□□ -0.12
NPHP4-205ENST00000466897 NDUFAF5Q5TEU4 345 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 IL23RQ5VWK5 629 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 MLIPQ5VWP3 458 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 SCUBE1Q8IWY4 988 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 EFCAB3Q8N7B9 438 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 ENDOVQ8N8Q3 282 aaKnown RBP14.31□□□□□ -0.12
NPHP4-205ENST00000466897 RFWD2Q8NHY2 731 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 KCNE4Q8WWG9 221 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 TANKQ92844 425 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 OR52B2Q96RD2 323 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 CSF3RQ99062 836 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 EBF4Q9BQW3 602 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 WDR41Q9HAD4 459 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 TEX10Q9NXF1 929 aaPredicted RBP14.31□□□□□ -0.12
NPHP4-205ENST00000466897 FBXW2Q9UKT8 454 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 TCFL5Q9UL49 500 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 MAPRE3Q9UPY8 281 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 FARSAQ9Y285 508 aaKnown RBP14.31□□□□□ -0.12
NPHP4-205ENST00000466897 PCDHA9Q9Y5H5 950 aa14.31□□□□□ -0.12
NPHP4-205ENST00000466897 ASPMQ8IZT6 3477 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 PRMT3O60678 531 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 AIFM1O95831 613 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 ALDOCP09972 364 aaKnown RBP14.3□□□□□ -0.12
NPHP4-205ENST00000466897 DRD4P21917 467 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 TACR1P25103 407 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 MRPL19P49406 292 aaKnown RBP14.3□□□□□ -0.12
NPHP4-205ENST00000466897 SEC24CP53992 1094 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 TAS2R50P59544 299 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 COL9A2Q14055 689 aaPredicted RBP14.3□□□□□ -0.12
NPHP4-205ENST00000466897 GSTA3Q16772 222 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 CRTC2Q53ET0 693 aaPredicted RBP14.3□□□□□ -0.12
NPHP4-205ENST00000466897 VWA2Q5GFL6 755 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 METTL21CQ5VZV1 264 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 OR52E8Q6IFG1 317 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 FAM71E1Q6IPT2 247 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 UNQ6494/PRO21346Q6UXR6 183 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 TMEM132CQ8N3T6 1108 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 LIX1Q8N485 282 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 PLPP5Q8NEB5 264 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 MTERF3Q96E29 417 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 YIPF2Q9BWQ6 316 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 BRINP2Q9C0B6 783 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 EPN3Q9H201 632 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 RPF2Q9H7B2 306 aaKnown RBP14.3□□□□□ -0.12
NPHP4-205ENST00000466897 GPN2Q9H9Y4 310 aaPredicted RBP14.3□□□□□ -0.12
NPHP4-205ENST00000466897 SEMA3GQ9NS98 782 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 MRGBPQ9NV56 204 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 AIG1Q9NVV5 245 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 DCTN4Q9UJW0 460 aa14.3□□□□□ -0.12
NPHP4-205ENST00000466897 IGKV3D-11A0A0A0MRZ8 115 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 A0A0G2JND7 137 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 TBX19O60806 448 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 CTNSO60931 367 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 IGHEP01854 428 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 IL3P08700 152 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 IDO1P14902 403 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 DDCP20711 480 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 RPL3P39023 403 aaKnown RBP14.29□□□□□ -0.12
NPHP4-205ENST00000466897 FOLR3P41439 243 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms