RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 RETREG3Q86VR2 466 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 LSMEM2Q8N112 164 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 OR4K1Q8NGD4 311 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 ADAMTS19Q8TE59 1207 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 THRSPQ92748 146 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 SECISBP2Q96T21 854 aaKnown RBP15.2■□□□□ 0.02
SMC4-204ENST00000462787 ASAH2Q9NR71 780 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 SULT1C4O75897 302 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 OSMP13725 252 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 ZNF534Q76KX8 674 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 OR51G2Q8NGK0 314 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 SYNDIG1Q9H7V2 258 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 GPSM3Q9Y4H4 160 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 TBX18O95935 607 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 ADARB1P78563 741 aaKnown RBP15.2■□□□□ 0.02
SMC4-204ENST00000462787 TATDN3Q17R31 274 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 CEACAM19Q7Z692 300 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 LHFPL3Q86UP9 236 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 ZNF563Q8TA94 476 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.2■□□□□ 0.027e-12■■■■■ 38.5
SMC4-204ENST00000462787 SLC38A8A6NNN8 435 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 ALDOCP09972 364 aaKnown RBP15.2■□□□□ 0.02
SMC4-204ENST00000462787 TRAPPC2P0DI81 140 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 TRAPPC2BP0DI82 140 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 PKLRP30613 574 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 FGL1Q08830 312 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 COL28A1Q2UY09 1125 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 ESCO2Q56NI9 601 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 TMED4Q7Z7H5 227 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 TP53INP2Q8IXH6 220 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 COX18Q8N8Q8 333 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 ZNF514Q96K75 400 aaPredicted RBP15.2■□□□□ 0.02
SMC4-204ENST00000462787 GPER1Q99527 375 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 NIPAL2Q9H841 368 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 UGT2A1Q9Y4X1 527 aa15.2■□□□□ 0.02
SMC4-204ENST00000462787 PON3Q15166 354 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 ZNF648Q5T619 568 aaPredicted RBP15.19■□□□□ 0.02
SMC4-204ENST00000462787 C14orf80Q86SX3 495 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 FAM217AQ8IXS0 508 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 Q8N9G6 341 aaPredicted RBP15.19■□□□□ 0.02
SMC4-204ENST00000462787 BBS10Q8TAM1 723 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 RSPH9Q9H1X1 276 aaPredicted RBP15.19■□□□□ 0.02
SMC4-204ENST00000462787 MRTO4Q9UKD2 239 aaKnown RBP15.19■□□□□ 0.02
SMC4-204ENST00000462787 SLC16A5O15375 505 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 SCN2BO60939 215 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 CPNE6O95741 557 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 MAP3K8P41279 467 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 BTG3Q14201 252 aaPredicted RBP15.19■□□□□ 0.02
SMC4-204ENST00000462787 GTDC1Q4AE62 458 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 SERPINA11Q86U17 422 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 CDADC1Q9BWV3 514 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 ZNF350Q9GZX5 532 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 OR51J1Q9H342 316 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 ENPP4Q9Y6X5 453 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 FAM155AB1AL88 458 aaPredicted RBP15.19■□□□□ 0.02
SMC4-204ENST00000462787 PRAF2O60831 178 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 DDX6P26196 483 aaKnown RBP eCLIP15.19■□□□□ 0.02
SMC4-204ENST00000462787 DDOSTP39656 456 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 RPL35P42766 123 aaKnown RBP15.19■□□□□ 0.02
SMC4-204ENST00000462787 CCR8P51685 355 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 WNT4P56705 351 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 OR12D2P58182 307 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 SYT6Q5T7P8 510 aaPredicted RBP15.19■□□□□ 0.02
SMC4-204ENST00000462787 CPZQ66K79 652 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 PTRH1Q86Y79 214 aaKnown RBP15.19■□□□□ 0.02
SMC4-204ENST00000462787 B3GNT7Q8NFL0 401 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 OR56A1Q8NGH5 318 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 GPR150Q8NGU9 434 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 RPL3LQ92901 407 aaKnown RBP15.19■□□□□ 0.02
SMC4-204ENST00000462787 ZNF436Q9C0F3 470 aaPredicted RBP15.19■□□□□ 0.02
SMC4-204ENST00000462787 RNF39Q9H2S5 420 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 TMEM5Q9Y2B1 443 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 CD8B2A6NJW9 211 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 ZNF670-ZNF695F2Z2N8 137 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 RBBP9O75884 186 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 CD8BP10966 210 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 CMPK1P30085 196 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 BMP8BP34820 402 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 MAN2A2P49641 1150 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 HK3P52790 923 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 CEBPGP53567 150 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 ARHGAP1Q07960 439 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 SCGB2B2Q4G0G5 96 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 CYP27C1Q4G0S4 372 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 ARSKQ6UWY0 536 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 SLC24A5Q71RS6 500 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 CHST9Q7L1S5 443 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 BMP8AQ7Z5Y6 402 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 DUS3LQ96G46 650 aaKnown RBP15.19■□□□□ 0.02
SMC4-204ENST00000462787 HDHD5Q9BXW7 423 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 OSER1Q9NX31 292 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 FER1L4A9Z1Z3 1794 aa15.19■□□□□ 0.02
SMC4-204ENST00000462787 SLC35F4A4IF30 521 aa15.18■□□□□ 0.02
SMC4-204ENST00000462787 ELOA3DA6NLF2 546 aaPredicted RBP15.18■□□□□ 0.02
SMC4-204ENST00000462787 CTDSP2O14595 271 aa15.18■□□□□ 0.02
SMC4-204ENST00000462787 GATBO75879 557 aaKnown RBP15.18■□□□□ 0.02
SMC4-204ENST00000462787 KRT33AO76009 404 aa15.18■□□□□ 0.02
SMC4-204ENST00000462787 IL1AP01583 271 aa15.18■□□□□ 0.02
SMC4-204ENST00000462787 TIA1P31483 386 aaKnown RBP eCLIP15.18■□□□□ 0.022e-7■■■□□ 18.7
SMC4-204ENST00000462787 ELOA3BQ3SY89 546 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms