RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 IGHEP01854 428 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 CYC1P08574 325 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 PRKAR1AP10644 381 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 KITP10721 976 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 MMP11P24347 488 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 TIA1P31483 386 aaKnown RBP eCLIP11.1□□□□□ -0.633e-12■■■■■ 63.1
CPNE1-221ENST00000462352 OTX2P32243 289 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 HNRNPFP52597 415 aaKnown RBP11.1□□□□□ -0.63
CPNE1-221ENST00000462352 MAPK12P53778 367 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 CXADRP78310 365 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 RHAGQ02094 409 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 TNFRSF17Q02223 184 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 VAC14Q08AM6 782 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 CDC20Q12834 499 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 KIAA0040Q15053 153 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 FAAH2Q6GMR7 532 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 GALNT18Q6P9A2 607 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 PPP1R32Q7Z5V6 425 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 RAB43Q86YS6 212 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 CRLF3Q8IUI8 442 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 ZNF595Q8IYB9 648 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 PLPP5Q8NEB5 264 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 FAM76AQ8TAV0 307 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 PIWIL2Q8TC59 973 aaKnown RBP11.1□□□□□ -0.63
CPNE1-221ENST00000462352 C19orf60Q96EN9 201 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 METTL2AQ96IZ6 378 aaKnown RBP11.1□□□□□ -0.63
CPNE1-221ENST00000462352 MESP1Q9BRJ9 268 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 EBPLQ9BY08 206 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 NUF2Q9BZD4 464 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 LRTM1Q9HBL6 345 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 SLCO1B3Q9NPD5 702 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 PFDN4Q9NQP4 134 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 RIC8BQ9NVN3 520 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 C1orf109Q9NX04 203 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 TEX10Q9NXF1 929 aaPredicted RBP11.1□□□□□ -0.63
CPNE1-221ENST00000462352 GIMAP2Q9UG22 337 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 POLR3HQ9Y535 204 aaPredicted RBP11.1□□□□□ -0.63
CPNE1-221ENST00000462352 HS3ST3B1Q9Y662 390 aa11.1□□□□□ -0.63
CPNE1-221ENST00000462352 CCDC88CQ9P219 2028 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 NUP210LQ5VU65 1888 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 GNG14A0A1W2PPG7 69 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 A0A1W2PR48 441 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 CLDN4O14493 209 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 SOCS6O14544 535 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 PROM1O43490 865 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 PRMT3O60678 531 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 PRKRAO75569 313 aaKnown RBP11.09□□□□□ -0.63
CPNE1-221ENST00000462352 AIFM1O95831 613 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 ANXA4P09525 319 aaPredicted RBP11.09□□□□□ -0.63
CPNE1-221ENST00000462352 C8orf89P0DMQ9 161 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 TLX1P31314 330 aaPredicted RBP11.09□□□□□ -0.63
CPNE1-221ENST00000462352 BUD31P41223 144 aaPredicted RBP11.09□□□□□ -0.63
CPNE1-221ENST00000462352 HK2P52789 917 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 HSD17B7P56937 341 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 TRA2BP62995 288 aaKnown RBP11.09□□□□□ -0.63
CPNE1-221ENST00000462352 RPL38P63173 70 aaKnown RBP11.09□□□□□ -0.63
CPNE1-221ENST00000462352 BTG2P78543 158 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 GALNTL6Q49A17 601 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 RFTN2Q52LD8 501 aaPredicted RBP11.09□□□□□ -0.63
CPNE1-221ENST00000462352 C18orf63Q68DL7 685 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 NOXRED1Q6NXP6 359 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 TMEM205Q6UW68 189 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 QSOX2Q6ZRP7 698 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 RGS9BPQ6ZS82 235 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 FAM47EQ6ZV65 393 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 MRGPREQ86SM8 312 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 SCUBE1Q8IWY4 988 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 METTL21AQ8WXB1 218 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 TSLPQ969D9 159 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 NACC2Q96BF6 587 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 TM4SF18Q96CE8 201 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 TUBGCP3Q96CW5 907 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 PPP1R36Q96LQ0 422 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 PPP3R2Q96LZ3 170 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 PTCHD1Q96NR3 888 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 PRDM9Q9NQV7 894 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 PRTFDC1Q9NRG1 225 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 MMACHCQ9Y4U1 282 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 PTPRQQ9UMZ3 2332 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 PKD1L2Q7Z442 2459 aa11.09□□□□□ -0.63
CPNE1-221ENST00000462352 IGKV3D-11A0A0A0MRZ8 115 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 BLACEA4D250 179 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 SLCO1B7G3V0H7 640 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 PCDH17O14917 1159 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 HDAC3O15379 428 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 CTNSO60931 367 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 PEX11AO75192 247 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 GUCY1B2O75343 617 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 MYO1DO94832 1006 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 NR2F6P10588 404 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 MAOAP21397 527 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 GUCY1A3Q02108 690 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 ZNF763Q0D2J5 394 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 SLC13A2Q13183 592 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 ATP1A4Q13733 1029 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 NSDHLQ15738 373 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 ATP6AP1LQ52LC2 224 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 C6orf136Q5SQH8 315 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 NDUFAF5Q5TEU4 345 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 KIRREL2Q6UWL6 708 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms