RNA–Protein interactions for RNA: ENST00000461974.1

FN1-215, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-215ENST00000461974 FASTKD3Q14CZ7 662 aaKnown RBP3.35□□□□□ -1.87
FN1-215ENST00000461974 CDC37Q16543 378 aaPredicted RBP3.35□□□□□ -1.87
FN1-215ENST00000461974 UPP1Q16831 310 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 LRRC37A5PQ49AS3 106 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 IFI44LQ53G44 452 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 CT45A2Q5DJT8 189 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 CES4AQ5XG92 561 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 B3GLCTQ6Y288 498 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 C17orf107Q6ZR85 190 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 RFPL4BQ6ZWI9 263 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 CNTN4Q8IWV2 1026 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 SLC43A2Q8N370 569 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 RTL3Q8N8U3 475 aaKnown RBP3.35□□□□□ -1.87
FN1-215ENST00000461974 GTF3AQ92664 365 aaKnown RBP3.35□□□□□ -1.87
FN1-215ENST00000461974 WBP2Q969T9 261 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 MOCOSQ96EN8 888 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 LINC00479Q96M42 142 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 LGMNQ99538 433 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 TRIM51Q9BSJ1 452 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 S100A14Q9HCY8 104 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 TMOD3Q9NYL9 352 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 HMG20BQ9P0W2 317 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 POMT2Q9UKY4 750 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 MRPS18CQ9Y3D5 142 aaKnown RBP3.35□□□□□ -1.87
FN1-215ENST00000461974 SNX5Q9Y5X3 404 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 ETV7Q9Y603 341 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 ZHX2Q9Y6X8 837 aa3.35□□□□□ -1.87
FN1-215ENST00000461974 KDM5CP41229 1560 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 RALGAPA1Q6GYQ0 2036 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 NEURL4Q96JN8 1562 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 CTTNBP2Q8WZ74 1663 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.34□□□□□ -1.87
FN1-215ENST00000461974 TRBV2A0A0J9YWF9 115 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 SMIM30A4D0T7 59 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 SLC15A5A6NIM6 579 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 SRRM4A7MD48 611 aaKnown RBP3.34□□□□□ -1.87
FN1-215ENST00000461974 G3V2L1 256 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 TFECO14948 347 aaPredicted RBP3.34□□□□□ -1.87
FN1-215ENST00000461974 CHUKO15111 745 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 TNFSF12O43508 249 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 LRCH4O75427 683 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 ZSCAN5DPP0CG00 497 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 ODC1P11926 461 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 UCP2P55851 309 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 IRX1P78414 480 aaPredicted RBP3.34□□□□□ -1.87
FN1-215ENST00000461974 HSPA14Q0VDF9 509 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 ZNF177Q13360 481 aaPredicted RBP3.34□□□□□ -1.87
FN1-215ENST00000461974 MSLNQ13421 630 aaPredicted RBP3.34□□□□□ -1.87
FN1-215ENST00000461974 MOGAT2Q3SYC2 334 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 CEP85LQ5SZL2 805 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 FAM182AQ5T1J6 154 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 C1orf189Q5VU69 101 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 LCLAT1Q6UWP7 414 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 LRRTM1Q86UE6 522 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 ZNF410Q86VK4 478 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 SMYD1Q8NB12 490 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 OR9Q2Q8NGE9 314 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 SPATA3Q8NHX4 192 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 RNASE8Q8TDE3 154 aaKnown RBP3.34□□□□□ -1.87
FN1-215ENST00000461974 ATP6V0A1Q93050 837 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 GAL3ST4Q96RP7 486 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 FAM213AQ9BRX8 229 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 KRTAP17-1Q9BYP8 105 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 B3GAT2Q9NPZ5 323 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 SPHK2Q9NRA0 654 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 CWC25Q9NXE8 425 aaPredicted RBP3.34□□□□□ -1.87
FN1-215ENST00000461974 ZNF319Q9P2F9 582 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 TRIM10Q9UDY6 481 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 ERRFI1Q9UJM3 462 aaPredicted RBP3.34□□□□□ -1.87
FN1-215ENST00000461974 PILRAQ9UKJ1 303 aa3.34□□□□□ -1.87
FN1-215ENST00000461974 CNTLNQ9NXG0 1405 aa3.34□□□□□ -1.88
FN1-215ENST00000461974 GOLGA3Q08378 1498 aa3.34□□□□□ -1.88
FN1-215ENST00000461974 CDK12Q9NYV4 1490 aaPredicted RBP3.34□□□□□ -1.88
FN1-215ENST00000461974 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.34□□□□□ -1.88
FN1-215ENST00000461974 MYO3AQ8NEV4 1616 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 RNF17Q9BXT8 1623 aaKnown RBP3.33□□□□□ -1.88
FN1-215ENST00000461974 NDUFAF8A1L188 74 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 C5orf51A6NDU8 294 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 TRIM64A6NGJ6 449 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 TRIM64BA6NI03 449 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 SLC9B1P1A6NJY1 282 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 KERAO60938 352 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 GAS8O95995 478 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 RPLP0P05388 317 aaKnown RBP3.33□□□□□ -1.88
FN1-215ENST00000461974 GSTA2P09210 222 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 PKLRP30613 574 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 FCGR2BP31994 310 aaPredicted RBP3.33□□□□□ -1.88
FN1-215ENST00000461974 FCGR2CP31995 323 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 ALDH3B1P43353 468 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 ZFP36L2P47974 494 aaKnown RBP3.33□□□□□ -1.88
FN1-215ENST00000461974 VEGFCP49767 419 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 NME5P56597 212 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 BACE1P56817 501 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 DHODHQ02127 395 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 NFATC2Q13469 925 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 LY6DQ14210 128 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 SPHARQ15513 63 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 STX1AQ16623 288 aa3.33□□□□□ -1.88
FN1-215ENST00000461974 RFTN2Q52LD8 501 aaPredicted RBP3.33□□□□□ -1.88
FN1-215ENST00000461974 SNRNP48Q6IEG0 339 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms