RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 GMPRP36959 345 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 MSH2P43246 934 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 ST13P50502 369 aaKnown RBP8.53□□□□□ -1.04
BRCA1-207ENST00000461798 CASP6P55212 293 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 SRSF11Q05519 484 aaKnown RBP8.53□□□□□ -1.04
BRCA1-207ENST00000461798 CKAP4Q07065 602 aaKnown RBP8.53□□□□□ -1.04
BRCA1-207ENST00000461798 SLC13A2Q13183 592 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 BIKQ13323 160 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 NAA30Q147X3 362 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-207ENST00000461798 ACAP2Q15057 778 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 MAPKAPK3Q16644 382 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 RNFT1Q5M7Z0 435 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 DEPDC1Q5TB30 811 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 METTL2BQ6P1Q9 378 aaKnown RBP8.53□□□□□ -1.04
BRCA1-207ENST00000461798 MED27Q6P2C8 311 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 XKRXQ6PP77 449 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 ZNF793Q6ZN11 406 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 CHSY3Q70JA7 882 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 GPALPP1Q8IXQ4 340 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 CENPLQ8N0S6 344 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-207ENST00000461798 ZNF808Q8N4W9 903 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-207ENST00000461798 ACOT4Q8N9L9 421 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 MORN4Q8NDC4 146 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 OR8K3Q8NH51 312 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 C16orf52Q8NHV5 167 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 PTPMT1Q8WUK0 201 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-207ENST00000461798 DAZLQ92904 295 aaKnown RBP8.53□□□□□ -1.04
BRCA1-207ENST00000461798 NCLNQ969V3 563 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 TMEM125Q96AQ2 219 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 NXNL1Q96CM4 212 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 CMTM7Q96FZ5 175 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 CCDC120Q96HB5 630 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 GPR78Q96P69 363 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 LRRC1Q9BTT6 524 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 ALOXE3Q9BYJ1 711 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 COPS7BQ9H9Q2 264 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-207ENST00000461798 PNO1Q9NRX1 252 aaKnown RBP8.53□□□□□ -1.04
BRCA1-207ENST00000461798 PSD3Q9NYI0 1048 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 OPTCQ9UBM4 332 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 YARS2Q9Y2Z4 477 aaKnown RBP8.53□□□□□ -1.04
BRCA1-207ENST00000461798 MYO7BQ6PIF6 2116 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 SYCE1LA8MT33 242 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 NPIPA5E9PKD4 350 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 KLRC4-KLRK1H3BQV0 150 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 UBXN8O00124 270 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 HNRNPRO43390 633 aaKnown RBP8.52□□□□□ -1.05
BRCA1-207ENST00000461798 UGDHO60701 494 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 ITGA10O75578 1167 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 KLHL2O95198 593 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 EPB42P16452 691 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 HIST1H1TP22492 207 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-207ENST00000461798 PPP2R1BP30154 601 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 PIK3CBP42338 1070 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 IGLV3-21P80748 117 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-207ENST00000461798 SLC7A5Q01650 507 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 SERTAD2Q14140 314 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 SLMAPQ14BN4 828 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 SETDB1Q15047 1291 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 PCBP2Q15366 365 aaKnown RBP eCLIP8.52□□□□□ -1.052e-7■■■□□ 17.1
BRCA1-207ENST00000461798 C3AR1Q16581 482 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 ZNF630Q2M218 657 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-207ENST00000461798 FAM83EQ2M2I3 478 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 AP5B1Q2VPB7 878 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 KHDRBS2Q5VWX1 349 aaKnown RBP8.52□□□□□ -1.05
BRCA1-207ENST00000461798 LIPJQ5W064 366 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 OR4C11Q6IEV9 310 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 GRHL2Q6ISB3 625 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 CEP128Q6ZU80 1094 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 MRGPRGQ86SM5 289 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 LURAP1LQ8IV03 231 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 SULF2Q8IWU5 870 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 GHDCQ8N2G8 530 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 MMGT1Q8N4V1 131 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 CPSF7Q8N684 471 aaKnown RBP8.52□□□□□ -1.05
BRCA1-207ENST00000461798 FAM47BQ8NA70 645 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 ZFP62Q8NB50 900 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-207ENST00000461798 OR14A16Q8NHC5 309 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 KCTD4Q8WVF5 259 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 ANKRD9Q96BM1 317 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-207ENST00000461798 CSF3RQ99062 836 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 MAPKAP1Q9BPZ7 522 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 CCDC77Q9BR77 488 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 TSPYL1Q9H0U9 437 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 ACSS3Q9H6R3 686 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 MS4A12Q9NXJ0 267 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 MYOTQ9UBF9 498 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 FBXW2Q9UKT8 454 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 NPIPA1Q9UND3 350 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 KLF13Q9Y2Y9 288 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-207ENST00000461798 TNPO3Q9Y5L0 923 aaKnown RBP8.52□□□□□ -1.05
BRCA1-207ENST00000461798 CLCA3PQ9Y6N3 262 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 CACNA1DQ01668 2161 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 CREBBPQ92793 2442 aa8.52□□□□□ -1.05
BRCA1-207ENST00000461798 CROCCQ5TZA2 2017 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 A0A096LPK6 155 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 ESYT3A0FGR9 886 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 SUPT3HB4E1H0 165 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 PRSS44E7EML9 344 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 H0YIV9 168 aa8.51□□□□□ -1.05
BRCA1-207ENST00000461798 RTCAO00442 366 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms