RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 SLC22A9Q8IVM8 553 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 LAS2Q8IYD9 372 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 L3MBTL4Q8NA19 623 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 OR7G3Q8NG95 312 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 OR4F6Q8NGB9 312 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 OR9A4Q8NGU2 314 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 RDH11Q8TC12 318 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 NT5CQ8TCD5 201 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 HAS2Q92819 552 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 EFCAB11Q9BUY7 163 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 GATA5Q9BWX5 397 aaPredicted RBP13.81□□□□□ -0.2
NCK1-202ENST00000460960 SHCBP1LQ9BZQ2 653 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 SLC6A16Q9GZN6 736 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 IQCGQ9H095 443 aaKnown RBP13.81□□□□□ -0.2
NCK1-202ENST00000460960 NT5DC2Q9H857 520 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 FARSBQ9NSD9 589 aaKnown RBP13.81□□□□□ -0.2
NCK1-202ENST00000460960 SENP1Q9P0U3 644 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 ABI3Q9P2A4 366 aa13.81□□□□□ -0.2
NCK1-202ENST00000460960 SETD2Q9BYW2 2564 aaPredicted RBP13.81□□□□□ -0.2
NCK1-202ENST00000460960 HIVEP1P15822 2718 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 ZNF860A6NHJ4 632 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 IDSB3KWA1 339 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 FAM227AF5H4B4 570 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 SGK494L7N484 410 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 OR4F21O95013 312 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 BMP10O95393 424 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 SERPINA7P05543 415 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 HEXBP07686 556 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 SSTR2P30874 369 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 ARL1P40616 181 aaPredicted RBP13.8□□□□□ -0.2
NCK1-202ENST00000460960 SMSP52788 366 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 DNAJB13P59910 316 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 RAB8AP61006 207 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 MAT1AQ00266 395 aaKnown RBP13.8□□□□□ -0.2
NCK1-202ENST00000460960 DDX39BQ13838 428 aaKnown RBP13.8□□□□□ -0.2
NCK1-202ENST00000460960 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.8□□□□□ -0.2
NCK1-202ENST00000460960 ABHD17BQ5VST6 288 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 MED27Q6P2C8 311 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 PRMT9Q6P2P2 845 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 KRT78Q8N1N4 520 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 AMER3Q8N944 861 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 CAMKVQ8NCB2 501 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 DNAJB8Q8NHS0 232 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 ZNF473Q8WTR7 871 aaKnown RBP13.8□□□□□ -0.2
NCK1-202ENST00000460960 CCT6BQ92526 530 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 PSMF1Q92530 271 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 ATP6V1E2Q96A05 226 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 MTFMTQ96DP5 389 aaKnown RBP13.8□□□□□ -0.2
NCK1-202ENST00000460960 MAGED4Q96JG8 741 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 KCNA7Q96RP8 456 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 MTERF1Q99551 399 aaKnown RBP13.8□□□□□ -0.2
NCK1-202ENST00000460960 SH3GL2Q99962 352 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 NTMT1Q9BV86 223 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 RHBGQ9H310 441 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 SSU72Q9NP77 194 aaKnown RBP13.8□□□□□ -0.2
NCK1-202ENST00000460960 KCNK9Q9NPC2 374 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 RIC8BQ9NVN3 520 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 TRPC4Q9UBN4 977 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 TINAGQ9UJW2 476 aa13.8□□□□□ -0.2
NCK1-202ENST00000460960 CACNA1CQ13936 2221 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 CPAMD8Q8IZJ3 1885 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 WDR91A4D1P6 747 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 LRIT2A6NDA9 550 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 C19orf84I3L1E1 186 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 PRPF4O43172 522 aaKnown RBP eCLIP13.79□□□□□ -0.2
NCK1-202ENST00000460960 SLC19A2O60779 497 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 DIAPH2O60879 1101 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 CLDN9O95484 217 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 ETHE1O95571 254 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 BPGMP07738 259 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 SLC35G6P0C7Q6 338 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 SMIM10L1P0DMW3 83 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 ITGAMP11215 1152 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 SERPINB4P48594 390 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 EFNA3P52797 238 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 FOXA1P55317 472 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 WDR4P57081 412 aaKnown RBP13.79□□□□□ -0.2
NCK1-202ENST00000460960 KRTAP10-9P60411 292 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 OLR1P78380 273 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 ADORA2A-AS1P86434 159 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 ZNF33BQ06732 778 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 PWP1Q13610 501 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 C3AR1Q16581 482 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 MUM1Q2TAK8 710 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 LIPMQ5VYY2 423 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 LIPJQ5W064 366 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 FRMD7Q6ZUT3 714 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 UBE3DQ7Z6J8 389 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 MILR1Q7Z6M3 343 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 CROCCP2Q86T23 111 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 CDH24Q86UP0 819 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 ZNF295-AS1Q8N0V1 137 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 AFAP1L2Q8N4X5 818 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 ANKRD42Q8N9B4 389 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 OR5T3Q8NGG3 340 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 HUS1BQ8NHY5 278 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 WDR20Q8TBZ3 569 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 UTP15Q8TED0 518 aaKnown RBP13.79□□□□□ -0.2
NCK1-202ENST00000460960 SMIM10Q96HG1 83 aa13.79□□□□□ -0.2
NCK1-202ENST00000460960 F2RL3Q96RI0 385 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms