RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 TWIST2Q8WVJ9 160 aa21.16■□□□□ 0.98
C9orf3-209ENST00000460573 METTL21AQ8WXB1 218 aa21.16■□□□□ 0.98
C9orf3-209ENST00000460573 SORBS1Q9BX66 1292 aaKnown RBP21.16■□□□□ 0.98
C9orf3-209ENST00000460573 C20orf27Q9GZN8 174 aa21.16■□□□□ 0.98
C9orf3-209ENST00000460573 VN1R1Q9GZP7 353 aa21.16■□□□□ 0.98
C9orf3-209ENST00000460573 INTS9Q9NV88 658 aaKnown RBP21.16■□□□□ 0.98
C9orf3-209ENST00000460573 SIRT5Q9NXA8 310 aa21.16■□□□□ 0.98
C9orf3-209ENST00000460573 SYNDIG1LA6NDD5 238 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 SNNO75324 88 aaPredicted RBP21.15■□□□□ 0.98
C9orf3-209ENST00000460573 GUCY1B2O75343 617 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 EEDO75530 441 aaKnown RBP21.15■□□□□ 0.98
C9orf3-209ENST00000460573 JRKO75564 520 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 KLK1P06870 262 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 PRPH2P23942 346 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 TLX1P31314 330 aaPredicted RBP21.15■□□□□ 0.98
C9orf3-209ENST00000460573 OTX2P32243 289 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 HMGCS1Q01581 520 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 FAM219BQ5XKK7 198 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 SCIMPQ6UWF3 145 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 QSOX2Q6ZRP7 698 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 GPR180Q86V85 440 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 ARFGAP2Q8N6H7 521 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 EXD3Q8N9H8 876 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 C7orf57Q8NEG2 295 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 AGR3Q8TD06 166 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 DYDC1Q8WWB3 177 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 SORT1Q99523 831 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 MAPKAP1Q9BPZ7 522 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 MCM8Q9UJA3 840 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 FBXW2Q9UKT8 454 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 MMACHCQ9Y4U1 282 aa21.15■□□□□ 0.98
C9orf3-209ENST00000460573 TMEM233B4DJY2 109 aa21.14■□□□□ 0.97
C9orf3-209ENST00000460573 CYR61O00622 381 aa21.14■□□□□ 0.97
C9orf3-209ENST00000460573 PEX12O00623 359 aa21.14■□□□□ 0.97
C9orf3-209ENST00000460573 PRMT3O60678 531 aa21.14■□□□□ 0.97
C9orf3-209ENST00000460573 B4GALT2O60909 372 aa21.14■□□□□ 0.97
C9orf3-209ENST00000460573 ALOX12BO75342 701 aa21.14■□□□□ 0.97
C9orf3-209ENST00000460573 FAM58BPP0C7Q3 252 aa21.14■□□□□ 0.97
C9orf3-209ENST00000460573 CPN2P22792 545 aa21.14■□□□□ 0.97
C9orf3-209ENST00000460573 TPP2P29144 1249 aaPredicted RBP21.14■□□□□ 0.97
C9orf3-209ENST00000460573 BUD31P41223 144 aaPredicted RBP21.14■□□□□ 0.97
C9orf3-209ENST00000460573 HSD17B7P56937 341 aa21.14■□□□□ 0.97
C9orf3-209ENST00000460573 FOXL2P58012 376 aa21.14■□□□□ 0.97
C9orf3-209ENST00000460573 TRA2BP62995 288 aaKnown RBP21.14■□□□□ 0.97
C9orf3-209ENST00000460573 SPDYAQ5MJ70 313 aa21.14■□□□□ 0.97
C9orf3-209ENST00000460573 CCNYL2Q5T2Q4 361 aa21.14■□□□□ 0.97
C9orf3-209ENST00000460573 TMEM205Q6UW68 189 aa21.14■□□□□ 0.97
C9orf3-209ENST00000460573 DDIASQ8IXT1 998 aa21.14■□□□□ 0.97
C9orf3-209ENST00000460573 C1orf52Q8N6N3 182 aaKnown RBP21.14■□□□□ 0.97
C9orf3-209ENST00000460573 ZNF781Q8N8C0 355 aa21.14■□□□□ 0.97
C9orf3-209ENST00000460573 FAM76AQ8TAV0 307 aa21.14■□□□□ 0.97
C9orf3-209ENST00000460573 ZNF75CPQ92670 426 aaPredicted RBP21.14■□□□□ 0.97
C9orf3-209ENST00000460573 TUBB1Q9H4B7 451 aa21.14■□□□□ 0.97
C9orf3-209ENST00000460573 ZNF395Q9H8N7 513 aaPredicted RBP21.14■□□□□ 0.97
C9orf3-209ENST00000460573 PRDM9Q9NQV7 894 aa21.14■□□□□ 0.97
C9orf3-209ENST00000460573 C19orf25Q9UFG5 118 aaPredicted RBP21.14■□□□□ 0.97
C9orf3-209ENST00000460573 CCL27Q9Y4X3 112 aa21.14■□□□□ 0.97
C9orf3-209ENST00000460573 ASB4Q9Y574 426 aa21.14■□□□□ 0.97
C9orf3-209ENST00000460573 ATMQ13315 3056 aa21.13■□□□□ 0.97
C9orf3-209ENST00000460573 FURINP09958 794 aa21.13■□□□□ 0.97
C9orf3-209ENST00000460573 C8orf89P0DMQ9 161 aa21.13■□□□□ 0.97
C9orf3-209ENST00000460573 GSTM5P46439 218 aa21.13■□□□□ 0.97
C9orf3-209ENST00000460573 RHAGQ02094 409 aa21.13■□□□□ 0.97
C9orf3-209ENST00000460573 GALNT18Q6P9A2 607 aa21.13■□□□□ 0.97
C9orf3-209ENST00000460573 PPP1R32Q7Z5V6 425 aa21.13■□□□□ 0.97
C9orf3-209ENST00000460573 MRGPREQ86SM8 312 aa21.13■□□□□ 0.97
C9orf3-209ENST00000460573 EFCAB3Q8N7B9 438 aa21.13■□□□□ 0.97
C9orf3-209ENST00000460573 APIPQ96GX9 242 aa21.13■□□□□ 0.97
C9orf3-209ENST00000460573 RBCK1Q9BYM8 510 aa21.13■□□□□ 0.97
C9orf3-209ENST00000460573 WDR41Q9HAD4 459 aa21.13■□□□□ 0.97
C9orf3-209ENST00000460573 HS3ST3B1Q9Y662 390 aa21.13■□□□□ 0.97
C9orf3-209ENST00000460573 FAM227AF5H4B4 570 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 SOCS6O14544 535 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 PIP5K1BO14986 540 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 PROM1O43490 865 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 TMPRSS11DO60235 418 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 CDC123O75794 336 aaPredicted RBP21.12■□□□□ 0.97
C9orf3-209ENST00000460573 MYO1DO94832 1006 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 ZIC2O95409 532 aaPredicted RBP21.12■□□□□ 0.97
C9orf3-209ENST00000460573 LINC00032P0C843 101 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 MAPK12P53778 367 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 RRADP55042 308 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 TNFRSF17Q02223 184 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 ATP1A1-AS1Q5TC04 95 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 Q6ZSR9 355 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 SHISA5Q8N114 240 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 TMEM102Q8N9M5 508 aaPredicted RBP21.12■□□□□ 0.97
C9orf3-209ENST00000460573 FAM47BQ8NA70 645 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 LRRC8CQ8TDW0 803 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 C11orf24Q96F05 449 aaPredicted RBP21.12■□□□□ 0.97
C9orf3-209ENST00000460573 FER1L6-AS2Q96M78 137 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 PTCHD1Q96NR3 888 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 PRTFDC1Q9NRG1 225 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 RIC8BQ9NVN3 520 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 C1orf109Q9NX04 203 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 MAN2B2Q9Y2E5 1009 aa21.12■□□□□ 0.97
C9orf3-209ENST00000460573 NUP210LQ5VU65 1888 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 CCDC88CQ9P219 2028 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 LOC102723996A0A087X1L8 192 aa21.11■□□□□ 0.97
C9orf3-209ENST00000460573 A0A1W2PQ72 361 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms