RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 VIPAS39Q9H9C1 493 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 NDE1Q9NXR1 346 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 KLK11Q9UBX7 282 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 APPL1Q9UKG1 709 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 PLCL2Q9UPR0 1127 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 MRPS18CQ9Y3D5 142 aaKnown RBP2.84□□□□□ -1.95
RFC4-211ENST00000460408 SNX5Q9Y5X3 404 aa2.84□□□□□ -1.95
RFC4-211ENST00000460408 UMODL1Q5DID0 1318 aa2.84□□□□□ -1.96
RFC4-211ENST00000460408 SNED1Q8TER0 1413 aa2.84□□□□□ -1.96
RFC4-211ENST00000460408 NEO1Q92859 1461 aa2.84□□□□□ -1.96
RFC4-211ENST00000460408 KIAA1217Q5T5P2 1943 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 EFCAB5A4FU69 1503 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 LRRC7Q96NW7 1537 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 IGHV3-38A0A0C4DH36 116 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 TRIM64A6NGJ6 449 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 TRIM64BA6NI03 449 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 SHISA7A6NL88 538 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 EPM2AB3EWF7 344 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 CHUKO15111 745 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 KERAO60938 352 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 RPLP0P05388 317 aaKnown RBP2.83□□□□□ -1.96
RFC4-211ENST00000460408 HMOX1P09601 288 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 SKILP12757 684 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 ANPEPP15144 967 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 CYP3A5P20815 502 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 UGT1A4P22310 534 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 CCR4P51679 360 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 PRELPP51888 382 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 SMSP52788 366 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 TMEM50BP56557 158 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 DHODHQ02127 395 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 GABPAQ06546 454 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 AP1B1Q10567 949 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 LCP2Q13094 533 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 PDE7AQ13946 482 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 NECTIN1Q15223 517 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 SPHARQ15513 63 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 C3AR1Q16581 482 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 MTHFSDQ2M296 383 aaKnown RBP2.83□□□□□ -1.96
RFC4-211ENST00000460408 FASTKD1Q53R41 847 aaKnown RBP2.83□□□□□ -1.96
RFC4-211ENST00000460408 CD164L2Q6UWJ8 174 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 TMEM64Q6YI46 380 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 ZNF497Q6ZNH5 498 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 RFPL4BQ6ZWI9 263 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 LRRTM1Q86UE6 522 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 ZNF410Q86VK4 478 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 ZFAND4Q86XD8 727 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 THEM5Q8N1Q8 247 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 SIDT2Q8NBJ9 832 aaKnown RBP2.83□□□□□ -1.96
RFC4-211ENST00000460408 AQP11Q8NBQ7 271 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 TRPV3Q8NET8 790 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 OR9Q2Q8NGE9 314 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 OR10G7Q8NGN6 311 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 SPATA18Q8TC71 538 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 GPR148Q8TDV2 347 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 GTF3AQ92664 365 aaKnown RBP2.83□□□□□ -1.96
RFC4-211ENST00000460408 HAS2Q92819 552 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 ULK4Q96C45 1275 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 LINC00479Q96M42 142 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 PRICKLE1Q96MT3 831 aaPredicted RBP2.83□□□□□ -1.96
RFC4-211ENST00000460408 GUCD1Q96NT3 240 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 PRAM1Q96QH2 718 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 ERGIC2Q96RQ1 377 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 SSX3Q99909 188 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 MCRIP2Q9BUT9 160 aaKnown RBP2.83□□□□□ -1.96
RFC4-211ENST00000460408 ACAT2Q9BWD1 397 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 TRIM7Q9C029 511 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 PARLQ9H300 379 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 C3orf14Q9HBI5 128 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 B3GAT2Q9NPZ5 323 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 PRMT8Q9NR22 394 aaPredicted RBP2.83□□□□□ -1.96
RFC4-211ENST00000460408 COMMD8Q9NX08 183 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 TEX10Q9NXF1 929 aaPredicted RBP2.83□□□□□ -1.96
RFC4-211ENST00000460408 THAP10Q9P2Z0 257 aaPredicted RBP2.83□□□□□ -1.96
RFC4-211ENST00000460408 KCNK6Q9Y257 313 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 EXOC6BQ9Y2D4 811 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 TRAPPC8Q9Y2L5 1435 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 SHANK2Q9UPX8 1470 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 ERICH3Q5RHP9 1530 aa2.83□□□□□ -1.96
RFC4-211ENST00000460408 ZCCHC11Q5TAX3 1644 aaKnown RBP2.82□□□□□ -1.96
RFC4-211ENST00000460408 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.82□□□□□ -1.96
RFC4-211ENST00000460408 KRTAP16-1A8MUX0 517 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 KPNA7A9QM74 516 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 SOCS3O14543 225 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 TNFSF12O43508 249 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 SNAP91O60641 907 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 MTRF1O75570 445 aaKnown RBP2.82□□□□□ -1.96
RFC4-211ENST00000460408 CXCL14O95715 111 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 CPNE6O95741 557 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 EPOP01588 193 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 B4GALT1P15291 398 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 HLA-DPA1P20036 260 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 GLRA1P23415 457 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 NDST2P52849 883 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 YBEYP58557 167 aaPredicted RBP2.82□□□□□ -1.96
RFC4-211ENST00000460408 ARF5P84085 180 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 ZNF177Q13360 481 aaPredicted RBP2.82□□□□□ -1.96
RFC4-211ENST00000460408 MEF2DQ14814 521 aa2.82□□□□□ -1.96
RFC4-211ENST00000460408 FASTKD3Q14CZ7 662 aaKnown RBP2.82□□□□□ -1.96
RFC4-211ENST00000460408 EPC2Q52LR7 807 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms