RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 NPPBP16860 134 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 GDF1P27539 372 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 AHRP35869 848 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 TRPC1P48995 793 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 WNT3P56703 355 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 HSD17B7P56937 341 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 STXBP1P61764 594 aaKnown RBP7.3□□□□□ -1.24
HPS4-207ENST00000459918 DHX9Q08211 1270 aaKnown RBP7.3□□□□□ -1.24
HPS4-207ENST00000459918 TOMM20Q15388 145 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 ELAVL1Q15717 326 aaKnown RBP7.3□□□□□ -1.24
HPS4-207ENST00000459918 XKR6Q5GH73 641 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 PRAMEF20Q5VT98 475 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 SHEQ5VZ18 495 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 ZNF549Q6P9A3 640 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 CXXC5Q7LFL8 322 aaKnown RBP7.3□□□□□ -1.24
HPS4-207ENST00000459918 MAATS1Q7Z4T9 603 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 PRIMA1Q86XR5 153 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 ARMC10Q8N2F6 343 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 GPATCH11Q8N954 259 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 GOLM1Q8NBJ4 401 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 RELL2Q8NC24 303 aaPredicted RBP7.3□□□□□ -1.24
HPS4-207ENST00000459918 FAM13CQ8NE31 585 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 OR5L2Q8NGL0 311 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 GABPB2Q8TAK5 448 aaPredicted RBP7.3□□□□□ -1.24
HPS4-207ENST00000459918 LINC01560Q8TB33 94 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 CALML6Q8TD86 181 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 ATL1Q8WXF7 558 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 NEIL2Q969S2 332 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 SH3GL2Q99962 352 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 SGPP1Q9BX95 441 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 SLC6A15Q9H2J7 730 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 CLK4Q9HAZ1 481 aaKnown RBP7.3□□□□□ -1.24
HPS4-207ENST00000459918 TAS2R13Q9NYV9 303 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 KLHL42Q9P2K6 505 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 SPRR3Q9UBC9 169 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 ZNF223Q9UK11 482 aaPredicted RBP7.3□□□□□ -1.24
HPS4-207ENST00000459918 CAMK2AQ9UQM7 478 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 JMJD1CQ15652 2540 aa7.3□□□□□ -1.24
HPS4-207ENST00000459918 MYOCOSA0A1B0GUC4 107 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 A0A1B0GVC2 190 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 C17orf105B2RV13 164 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 INAFM1C9JVW0 142 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 GOLGA8MH3BSY2 632 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 DYRK3O43781 588 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 ERN1O75460 977 aaKnown RBP7.29□□□□□ -1.24
HPS4-207ENST00000459918 TRAPPC6AO75865 159 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 CCL3P10147 92 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 COX7A2P14406 83 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 TPSB2P20231 275 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 HOXC12P31275 282 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 PIGAP37287 484 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 SCTRP47872 440 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 AGFG1P52594 562 aaKnown RBP7.29□□□□□ -1.24
HPS4-207ENST00000459918 HK2P52789 917 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 CDK16Q00536 496 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 RCN2Q14257 317 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 SF3B4Q15427 424 aaKnown RBP eCLIP7.29□□□□□ -1.241e-9■■■■□ 23.3
HPS4-207ENST00000459918 SIX1Q15475 284 aaPredicted RBP7.29□□□□□ -1.24
HPS4-207ENST00000459918 TRIP13Q15645 432 aaPredicted RBP7.29□□□□□ -1.24
HPS4-207ENST00000459918 TPSAB1Q15661 275 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 DUPD1Q68J44 220 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 TRIM40Q6P9F5 258 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 CYHR1Q6ZMK1 362 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 GAS2L3Q86XJ1 694 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 LACC1Q8IV20 430 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 ULK2Q8IYT8 1036 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 NAXEQ8NCW5 288 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 SIMC1Q8NDZ2 872 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 ABHD11Q8NFV4 315 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 TNIP2Q8NFZ5 429 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 OR14A16Q8NHC5 309 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 SPATA3Q8NHX4 192 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 SLC22A8Q8TCC7 542 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 GAL3ST3Q96A11 431 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 KIAA1191Q96A73 305 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 ARSGQ96EG1 525 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 HES6Q96HZ4 224 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 SGCZQ96LD1 299 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 Q96MF0 132 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 GAL3ST4Q96RP7 486 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 TRIB1Q96RU8 372 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 FAM167BQ9BTA0 163 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 SPNS1Q9H2V7 528 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 KLHL31Q9H511 634 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 IARS2Q9NSE4 1012 aaKnown RBP7.29□□□□□ -1.24
HPS4-207ENST00000459918 EIF3LQ9Y262 564 aaKnown RBP7.29□□□□□ -1.24
HPS4-207ENST00000459918 ATG4BQ9Y4P1 393 aa7.29□□□□□ -1.24
HPS4-207ENST00000459918 TCRBV7S3A2A0A539 114 aa7.28□□□□□ -1.24
HPS4-207ENST00000459918 SYNDIG1LA6NDD5 238 aa7.28□□□□□ -1.24
HPS4-207ENST00000459918 SDR42E2A6NKP2 422 aa7.28□□□□□ -1.24
HPS4-207ENST00000459918 H2AFYO75367 372 aaKnown RBP7.28□□□□□ -1.24
HPS4-207ENST00000459918 HAUS5O94927 633 aa7.28□□□□□ -1.24
HPS4-207ENST00000459918 LRATO95237 230 aa7.28□□□□□ -1.24
HPS4-207ENST00000459918 SERPINA6P08185 405 aa7.28□□□□□ -1.24
HPS4-207ENST00000459918 ENDOUP21128 410 aaKnown RBP7.28□□□□□ -1.24
HPS4-207ENST00000459918 HPDP32754 393 aaPredicted RBP7.28□□□□□ -1.24
HPS4-207ENST00000459918 CPOXP36551 454 aa7.28□□□□□ -1.24
HPS4-207ENST00000459918 MSH2P43246 934 aa7.28□□□□□ -1.24
HPS4-207ENST00000459918 MASP1P48740 699 aa7.28□□□□□ -1.24
HPS4-207ENST00000459918 PLA2G16P53816 162 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms