RNA–Protein interactions for RNA: ENST00000459640.5

NECAP2-204, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 3

Gene NECAP2, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-204ENST00000459640 MZB1Q8WU39 189 aa13.17□□□□□ -0.3
NECAP2-204ENST00000459640 RGMAQ96B86 450 aa13.17□□□□□ -0.3
NECAP2-204ENST00000459640 SIGLEC12Q96PQ1 595 aa13.17□□□□□ -0.3
NECAP2-204ENST00000459640 TAAR6Q96RI8 345 aa13.17□□□□□ -0.3
NECAP2-204ENST00000459640 BARD1Q99728 777 aaKnown RBP13.17□□□□□ -0.3
NECAP2-204ENST00000459640 HES7Q9BYE0 225 aa13.17□□□□□ -0.3
NECAP2-204ENST00000459640 ANKZF1Q9H8Y5 726 aa13.17□□□□□ -0.3
NECAP2-204ENST00000459640 AGPAT4Q9NRZ5 378 aa13.17□□□□□ -0.3
NECAP2-204ENST00000459640 TSC22D4Q9Y3Q8 395 aa13.17□□□□□ -0.3
NECAP2-204ENST00000459640 RP1L1Q8IWN7 2480 aaPredicted RBP13.16□□□□□ -0.3
NECAP2-204ENST00000459640 A0A1W2PPM1 405 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 ANKUB1A6NFN9 424 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 PRAMEF2O60811 474 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 EEDO75530 441 aaKnown RBP13.16□□□□□ -0.3
NECAP2-204ENST00000459640 CBX6O95503 412 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 IFNA16P05015 189 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 TNFRSF8P28908 595 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 TPP2P29144 1249 aaPredicted RBP13.16□□□□□ -0.3
NECAP2-204ENST00000459640 CD96P40200 585 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 HNRNPH2P55795 449 aaKnown RBP13.16□□□□□ -0.3
NECAP2-204ENST00000459640 PMP22Q01453 160 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 SGO1Q5FBB7 561 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 C18orf63Q68DL7 685 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 TTC19Q6DKK2 380 aaPredicted RBP13.16□□□□□ -0.3
NECAP2-204ENST00000459640 LETMD1Q6P1Q0 360 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 RPS19BP1Q86WX3 136 aaKnown RBP13.16□□□□□ -0.3
NECAP2-204ENST00000459640 CNPY4Q8N129 248 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 EIF1ADQ8N9N8 165 aaKnown RBP13.16□□□□□ -0.3
NECAP2-204ENST00000459640 APCDD1LQ8NCL9 501 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 B3GNT7Q8NFL0 401 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 SUN3Q8TAQ9 357 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 EPS8L3Q8TE67 593 aaKnown RBP13.16□□□□□ -0.3
NECAP2-204ENST00000459640 NCLNQ969V3 563 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 TMEM237Q96Q45 408 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 UTP23Q9BRU9 249 aaKnown RBP13.16□□□□□ -0.3
NECAP2-204ENST00000459640 NTMT1Q9BV86 223 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 ZNF717Q9BY31 904 aaPredicted RBP13.16□□□□□ -0.3
NECAP2-204ENST00000459640 ALOXE3Q9BYJ1 711 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 ADAP2Q9NPF8 381 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 KLHL1Q9NR64 748 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 ABI3Q9P2A4 366 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 FETUBQ9UGM5 382 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 ZNF223Q9UK11 482 aaPredicted RBP13.16□□□□□ -0.3
NECAP2-204ENST00000459640 SPACA6W5XKT8 324 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 DOPEY2Q9Y3R5 2298 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 ZGRF1Q86YA3 2104 aa13.16□□□□□ -0.3
NECAP2-204ENST00000459640 SVILO95425 2214 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 EML6Q6ZMW3 1958 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 DLX3O60479 287 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 CTNSO60931 367 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 SEMA7AO75326 666 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 AGFG2O95081 481 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 GBAP04062 536 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 TAC1P20366 129 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 PTX3P26022 381 aaPredicted RBP13.15□□□□□ -0.3
NECAP2-204ENST00000459640 BSGP35613 385 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 HERVK_113P63132 956 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 TNFRSF17Q02223 184 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 OC90Q02509 493 aaPredicted RBP13.15□□□□□ -0.3
NECAP2-204ENST00000459640 STX4Q12846 297 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 OR1C1Q15619 314 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 ZNF766Q5HY98 468 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 FHL5Q5TD97 284 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 ZNF468Q5VIY5 522 aaPredicted RBP13.15□□□□□ -0.3
NECAP2-204ENST00000459640 FRG2Q64ET8 278 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 RPUSD3Q6P087 351 aaKnown RBP13.15□□□□□ -0.3
NECAP2-204ENST00000459640 MILR1Q7Z6M3 343 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 OR4N5Q8IXE1 308 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 BCORP1Q8N888 145 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 MDS2Q8NDY4 140 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 TRPC4APQ8TEL6 797 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 FAR1Q8WVX9 515 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 ANKRD9Q96BM1 317 aaPredicted RBP13.15□□□□□ -0.3
NECAP2-204ENST00000459640 VMP1Q96GC9 406 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 FRG2BQ96QU4 278 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 ERVK-6Q9BXR3 956 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 DEFB126Q9BYW3 111 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 FARSBQ9NSD9 589 aaKnown RBP13.15□□□□□ -0.3
NECAP2-204ENST00000459640 OLAHQ9NV23 265 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 ATG4BQ9Y4P1 393 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 COL12A1Q99715 3063 aa13.15□□□□□ -0.3
NECAP2-204ENST00000459640 FLNCQ14315 2725 aa13.14□□□□□ -0.31
NECAP2-204ENST00000459640 A0A0A6YYD5 115 aa13.14□□□□□ -0.31
NECAP2-204ENST00000459640 FOXE1O00358 373 aaPredicted RBP13.14□□□□□ -0.31
NECAP2-204ENST00000459640 TMPRSS11DO60235 418 aa13.14□□□□□ -0.31
NECAP2-204ENST00000459640 FGF17O60258 216 aa13.14□□□□□ -0.31
NECAP2-204ENST00000459640 PRKNO60260 465 aaPredicted RBP13.14□□□□□ -0.31
NECAP2-204ENST00000459640 SUPT7LO94864 414 aa13.14□□□□□ -0.31
NECAP2-204ENST00000459640 OR4F21O95013 312 aa13.14□□□□□ -0.31
NECAP2-204ENST00000459640 RASAL1O95294 804 aa13.14□□□□□ -0.31
NECAP2-204ENST00000459640 OTCP00480 354 aa13.14□□□□□ -0.31
NECAP2-204ENST00000459640 RNF224P0DH78 156 aa13.14□□□□□ -0.31
NECAP2-204ENST00000459640 CLCN2P51788 898 aa13.14□□□□□ -0.31
NECAP2-204ENST00000459640 MLF1P58340 268 aa13.14□□□□□ -0.31
NECAP2-204ENST00000459640 VSNL1P62760 191 aa13.14□□□□□ -0.31
NECAP2-204ENST00000459640 CLCQ05315 142 aa13.14□□□□□ -0.31
NECAP2-204ENST00000459640 IFT88Q13099 833 aa13.14□□□□□ -0.31
NECAP2-204ENST00000459640 CUL3Q13618 768 aa13.14□□□□□ -0.31
NECAP2-204ENST00000459640 ELOAQ14241 798 aaKnown RBP13.14□□□□□ -0.31
NECAP2-204ENST00000459640 TERF2Q15554 542 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms