RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 DDCP20711 480 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 TPP2P29144 1249 aaPredicted RBP8.5□□□□□ -1.05
VPS50-207ENST00000458530 HNRNPH1P31943 449 aaKnown RBP8.5□□□□□ -1.05
VPS50-207ENST00000458530 BSGP35613 385 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 GPR3P46089 330 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 MAZP56270 477 aaKnown RBP8.5□□□□□ -1.05
VPS50-207ENST00000458530 TAS2R50P59544 299 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 GPLD1P80108 840 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 C19orf57Q0VDD7 668 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 PDE7AQ13946 482 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 CEACAM7Q14002 265 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 CAPRIN1Q14444 709 aaKnown RBP8.5□□□□□ -1.05
VPS50-207ENST00000458530 SLC9A5Q14940 896 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 RCN1Q15293 331 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 DEFB133Q30KQ1 61 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 MTX3Q5HYI7 312 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 OR4F3Q6IEY1 312 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 NANOGP8Q6NSW7 305 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 DLEU7Q6UYE1 221 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 RNF44Q7L0R7 432 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 DHFR2Q86XF0 187 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 NAXDQ8IW45 347 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 SLC15A3Q8IY34 581 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 ENDOVQ8N8Q3 282 aaKnown RBP8.5□□□□□ -1.05
VPS50-207ENST00000458530 OR7A2PQ8NGA2 310 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 ZFP28Q8NHY6 868 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 WDR48Q8TAF3 677 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 FLVCR1-AS1Q8TAF5 88 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 DNAJB14Q8TBM8 379 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 SLC26A7Q8TE54 656 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 WDR60Q8WVS4 1066 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 GFM2Q969S9 779 aaKnown RBP8.5□□□□□ -1.05
VPS50-207ENST00000458530 COQ8BQ96D53 544 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 MS4A6EQ96DS6 147 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 ZDHHC12Q96GR4 267 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 CRELD1Q96HD1 420 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 AHCYL2Q96HN2 611 aaKnown RBP8.5□□□□□ -1.05
VPS50-207ENST00000458530 EGLN2Q96KS0 407 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 CCDC115Q96NT0 180 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 ANKRD27Q96NW4 1050 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 PANX1Q96RD7 426 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 C17orf62Q9BQA9 187 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 SLC39A3Q9BRY0 314 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 SPATA9Q9BWV2 254 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 GTPBP2Q9BX10 602 aaKnown RBP8.5□□□□□ -1.05
VPS50-207ENST00000458530 FAM117AQ9C073 453 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 RAB33BQ9H082 229 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 VCX3BQ9H321 246 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 NANOGQ9H9S0 305 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 NEUROD4Q9HD90 331 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 C1GALT1Q9NS00 363 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 GIMAP4Q9NUV9 329 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 NLGN3Q9NZ94 848 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 EHD3Q9NZN3 535 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 SH3BP4Q9P0V3 963 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 STOML1Q9UBI4 398 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 CD300AQ9UGN4 299 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 PHF11Q9UIL8 331 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 MAGEL2Q9UJ55 1249 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 VPS4AQ9UN37 437 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 PCDHA9Q9Y5H5 950 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 SNX13Q9Y5W8 968 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 SPACA6W5XKT8 324 aa8.5□□□□□ -1.05
VPS50-207ENST00000458530 PTPN13Q12923 2485 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 KNL1Q8NG31 2342 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 NUP214P35658 2090 aaPredicted RBP8.49□□□□□ -1.05
VPS50-207ENST00000458530 COL6A6A6NMZ7 2263 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 A0A0A6YYD5 115 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 PRORSD1PA6NEY8 169 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 AQP12BA6NM10 295 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 GSTA4O15217 222 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 ATXN7O15265 892 aaPredicted RBP8.49□□□□□ -1.05
VPS50-207ENST00000458530 PDPK1O15530 556 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 LCMT2O60294 686 aaKnown RBP8.49□□□□□ -1.05
VPS50-207ENST00000458530 SCELO95171 688 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 PRB1P04280 392 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 SYPP08247 313 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 IL3P08700 152 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 ZNF883P0CG24 379 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 GLB1P16278 677 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 TCN1P20061 433 aaPredicted RBP8.49□□□□□ -1.05
VPS50-207ENST00000458530 HIST1H1TP22492 207 aaPredicted RBP8.49□□□□□ -1.05
VPS50-207ENST00000458530 HTR1EP28566 365 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 EPHA8P29322 1005 aaPredicted RBP8.49□□□□□ -1.05
VPS50-207ENST00000458530 NTSP30990 170 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 CCT8P50990 548 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 PLA2G16P53816 162 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 ATXN3P54252 364 aaPredicted RBP8.49□□□□□ -1.05
VPS50-207ENST00000458530 YBX1P67809 324 aaKnown RBP8.49□□□□□ -1.05
VPS50-207ENST00000458530 LIPEQ05469 1076 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 IRGCQ6NXR0 463 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 ZCCHC8Q6NZY4 707 aaKnown RBP8.49□□□□□ -1.05
VPS50-207ENST00000458530 ERICH5Q6P6B1 374 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 ABHD17CQ6PCB6 329 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 DNAJC14Q6Y2X3 702 aaPredicted RBP8.49□□□□□ -1.05
VPS50-207ENST00000458530 TRIM73Q86UV7 250 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 SPATA24Q86W54 205 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 PLXDC1Q8IUK5 500 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 PLD3Q8IV08 490 aa8.49□□□□□ -1.05
VPS50-207ENST00000458530 AQP12AQ8IXF9 295 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms