RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 LZICQ8WZA0 190 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 RDH12Q96NR8 316 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 QRFPRQ96P65 431 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 GDF15Q99988 308 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 YIPF4Q9BSR8 244 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 AICDAQ9GZX7 198 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 RMI1Q9H9A7 625 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 TMEM184CQ9NVA4 438 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 PTTG2Q9NZH5 202 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 C4orf51C9J302 202 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 BTN3A3O00478 584 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 SEMG1P04279 462 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 FUT4P22083 530 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 UQCRC2P22695 453 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 CRHBPP24387 322 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 PEBP1P30086 187 aaKnown RBP11.2□□□□□ -0.62
VTA1-203ENST00000452973 HLCSP50747 726 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 LSAMPQ13449 338 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 GPR153Q6NV75 609 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 Q6ZPB1 254 aaPredicted RBP11.2□□□□□ -0.62
VTA1-203ENST00000452973 TRIM73Q86UV7 250 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 OR10G6Q8NH81 332 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 CREB3L4Q8TEY5 395 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 DGCR6LQ9BY27 220 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 NAA50Q9GZZ1 169 aaKnown RBP11.2□□□□□ -0.62
VTA1-203ENST00000452973 SYNPO2LQ9H987 977 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 PREBQ9HCU5 417 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 TUBA8Q9NY65 449 aaPredicted RBP11.2□□□□□ -0.62
VTA1-203ENST00000452973 NDUFAF4Q9P032 175 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 GMPPBQ9Y5P6 360 aa11.2□□□□□ -0.62
VTA1-203ENST00000452973 TNFRSF11BO00300 401 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 PRAMEF10O60809 474 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 TRMUO75648 421 aaKnown RBP11.19□□□□□ -0.62
VTA1-203ENST00000452973 HTR1BP28222 390 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 ITGA1P56199 1179 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 ISL1P61371 349 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 FADDQ13158 208 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 SLAMF1Q13291 335 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 IFI44LQ53G44 452 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 C6orf120Q7Z4R8 191 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 AMIGO1Q86WK6 493 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 PATE1Q8WXA2 126 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 BMFQ96LC9 184 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 SPATA9Q9BWV2 254 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 MVB12BQ9H7P6 319 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 KCNK12Q9HB15 430 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 TRPC4Q9UBN4 977 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 TSC22D4Q9Y3Q8 395 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 COLEC10Q9Y6Z7 277 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 ARHGEF17Q96PE2 2063 aaPredicted RBP11.19□□□□□ -0.62
VTA1-203ENST00000452973 KLHL33A6NCF5 533 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 C2CD4DB7Z1M9 353 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 TMX2-CTNND1H3BSU7 103 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 PGRMC2O15173 223 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 NME6O75414 186 aaPredicted RBP11.19□□□□□ -0.62
VTA1-203ENST00000452973 TEAD1P28347 426 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 DGKEP52429 567 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 BIRC2Q13490 618 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 DUSP7Q16829 419 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 ZBED5Q49AG3 693 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 TOR1AIP1Q5JTV8 583 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 TSEN54Q7Z6J9 526 aaKnown RBP11.19□□□□□ -0.62
VTA1-203ENST00000452973 OR5D16Q8NGK9 328 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 XAGE5Q8WWM1 108 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 POP5Q969H6 163 aaKnown RBP11.19□□□□□ -0.62
VTA1-203ENST00000452973 KCNC2Q96PR1 638 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 MYO15AQ9UKN7 3530 aa11.19□□□□□ -0.62
VTA1-203ENST00000452973 A0A1W2PS29 197 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 PRAMEF25A6NGN4 478 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 C9P02748 559 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 CERS1P27544 350 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 FEN1P39748 380 aaKnown RBP11.18□□□□□ -0.62
VTA1-203ENST00000452973 CCT3P49368 545 aaKnown RBP11.18□□□□□ -0.62
VTA1-203ENST00000452973 CLK3P49761 638 aaKnown RBP11.18□□□□□ -0.62
VTA1-203ENST00000452973 SMN1Q16637 294 aaKnown RBP11.18□□□□□ -0.62
VTA1-203ENST00000452973 RFX4Q33E94 735 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 IQCCQ4KMZ1 466 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 TJAP1Q5JTD0 557 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 ZNF691Q5VV52 312 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 BROXQ5VW32 411 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 CWF19L1Q69YN2 538 aaKnown RBP11.18□□□□□ -0.62
VTA1-203ENST00000452973 KDM4DQ6B0I6 523 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 ZBTB46Q86UZ6 589 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 SFTPA2Q8IWL1 248 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 SLC44A3Q8N4M1 653 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 SMRP1Q8NCR6 262 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 SLC38A5Q8WUX1 472 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 OR5P2Q8WZ92 322 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 ISOC1Q96CN7 298 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 BBS4Q96RK4 519 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 FEVQ99581 238 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 SRMSQ9H3Y6 488 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 RLIMQ9NVW2 624 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 ZNF624Q9P2J8 865 aaPredicted RBP11.18□□□□□ -0.62
VTA1-203ENST00000452973 ANGPT4Q9Y264 503 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 ATG4BQ9Y4P1 393 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 MDC1Q14676 2089 aaKnown RBP11.18□□□□□ -0.62
VTA1-203ENST00000452973 TRBC2A0A5B9 178 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 B4GALT2O60909 372 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 CLEC3AO75596 197 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms