RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 TCN2P20062 427 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 JAK1P23458 1154 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 BUD31P41223 144 aaPredicted RBP10.92□□□□□ -0.66
SCN9A-204ENST00000452182 HNRNPH2P55795 449 aaKnown RBP10.92□□□□□ -0.66
SCN9A-204ENST00000452182 TNFRSF17Q02223 184 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 COL9A2Q14055 689 aaPredicted RBP10.92□□□□□ -0.66
SCN9A-204ENST00000452182 NKG7Q16617 165 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 SYT16Q17RD7 645 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 LSM12Q3MHD2 195 aaKnown RBP10.92□□□□□ -0.66
SCN9A-204ENST00000452182 IL23RQ5VWK5 629 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 FAM199XQ6PEV8 388 aaPredicted RBP10.92□□□□□ -0.66
SCN9A-204ENST00000452182 IKBIPQ70UQ0 350 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 FAM9CQ8IZT9 166 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 RFWD2Q8NHY2 731 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 STT3BQ8TCJ2 826 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 CT55Q8WUE5 264 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 TM4SF18Q96CE8 201 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 PEX11GQ96HA9 241 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 OR52B2Q96RD2 323 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 SPSB2Q99619 263 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 EBF4Q9BQW3 602 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 NSRP1Q9H0G5 558 aaKnown RBP10.92□□□□□ -0.66
SCN9A-204ENST00000452182 MYNNQ9NPC7 610 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 CTSFQ9UBX1 484 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 GIMAP2Q9UG22 337 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 DCTN4Q9UJW0 460 aa10.92□□□□□ -0.66
SCN9A-204ENST00000452182 EIF3LQ9Y262 564 aaKnown RBP10.92□□□□□ -0.66
SCN9A-204ENST00000452182 MRPS33Q9Y291 106 aaKnown RBP10.92□□□□□ -0.66
SCN9A-204ENST00000452182 A0A0G2JND7 137 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 GOLGA8QA0A0J9YX86 632 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 A0A1W2PR48 441 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 GOLGA8OA6NCC3 632 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 GOLGA8NF8WBI6 632 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 PSMD12O00232 456 aaPredicted RBP10.91□□□□□ -0.66
SCN9A-204ENST00000452182 KLF7O75840 302 aaPredicted RBP10.91□□□□□ -0.66
SCN9A-204ENST00000452182 BCKDHAP12694 445 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 DRD2P14416 443 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 DRD4P21917 467 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 CPN2P22792 545 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 TLX1P31314 330 aaPredicted RBP10.91□□□□□ -0.66
SCN9A-204ENST00000452182 ASMTP46597 345 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 IRX1P78414 480 aaPredicted RBP10.91□□□□□ -0.66
SCN9A-204ENST00000452182 HEPACAMQ14CZ8 416 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 VWA2Q5GFL6 755 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 NDUFAF5Q5TEU4 345 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 MLIPQ5VWP3 458 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 CLNKQ7Z7G1 428 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 ZC3H7AQ8IWR0 971 aaKnown RBP10.91□□□□□ -0.66
SCN9A-204ENST00000452182 ZNF595Q8IYB9 648 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 IL22RA1Q8N6P7 574 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 ZNF248Q8NDW4 579 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 C7orf57Q8NEG2 295 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 OR2Y1Q8NGV0 311 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 C16orf78Q8WTQ4 265 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 MIEF2Q96C03 454 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 FAIM2Q9BWQ8 316 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 EBPLQ9BY08 206 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 EPN3Q9H201 632 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 CCDC86Q9H6F5 360 aaKnown RBP10.91□□□□□ -0.66
SCN9A-204ENST00000452182 LANCL2Q9NS86 450 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 KCND3Q9UK17 655 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 CROTQ9UKG9 612 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 FBXW2Q9UKT8 454 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 PADI2Q9Y2J8 665 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 C1orf226A1L170 272 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 CLDN4O14493 209 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 CNOT3O75175 753 aaKnown RBP10.91□□□□□ -0.66
SCN9A-204ENST00000452182 ALDOCP09972 364 aaKnown RBP10.91□□□□□ -0.66
SCN9A-204ENST00000452182 NR2F6P10588 404 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 TACR1P25103 407 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 ARFIP2P53365 341 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 HSD17B7P56937 341 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 TAS2R50P59544 299 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 RPS15P62841 145 aaKnown RBP10.91□□□□□ -0.66
SCN9A-204ENST00000452182 KLC1Q07866 573 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 DNASE1L3Q13609 305 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 METTL21CQ5VZV1 264 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 NXNQ6DKJ4 435 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 FAM71E1Q6IPT2 247 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 QSOX2Q6ZRP7 698 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 CPLX4Q7Z7G2 160 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 TMEM132CQ8N3T6 1108 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 ENDOVQ8N8Q3 282 aaKnown RBP10.91□□□□□ -0.66
SCN9A-204ENST00000452182 TANKQ92844 425 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 NACC2Q96BF6 587 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 THOC1Q96FV9 657 aaKnown RBP10.91□□□□□ -0.66
SCN9A-204ENST00000452182 EFHD1Q9BUP0 239 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 C1orf50Q9BV19 199 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 YIPF2Q9BWQ6 316 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 TMEM120AQ9BXJ8 343 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 DPH1Q9BZG8 443 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 BRINP2Q9C0B6 783 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 RPF2Q9H7B2 306 aaKnown RBP10.91□□□□□ -0.66
SCN9A-204ENST00000452182 WDR41Q9HAD4 459 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 TEX10Q9NXF1 929 aaPredicted RBP10.91□□□□□ -0.66
SCN9A-204ENST00000452182 EHD3Q9NZN3 535 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 FARSAQ9Y285 508 aaKnown RBP10.91□□□□□ -0.66
SCN9A-204ENST00000452182 MMACHCQ9Y4U1 282 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 PCDHA9Q9Y5H5 950 aa10.91□□□□□ -0.66
SCN9A-204ENST00000452182 LOC101059948A0A1B0GTJ6 334 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms