RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 COX14Q96I36 57 aa16.14■□□□□ 0.17
TOM1-210ENST00000449058 MAPKAP1Q9BPZ7 522 aa16.14■□□□□ 0.17
TOM1-210ENST00000449058 SLAMF7Q9NQ25 335 aa16.14■□□□□ 0.17
TOM1-210ENST00000449058 SPATA7Q9P0W8 599 aa16.14■□□□□ 0.17
TOM1-210ENST00000449058 ENOPH1Q9UHY7 261 aa16.14■□□□□ 0.17
TOM1-210ENST00000449058 WBP11Q9Y2W2 641 aaKnown RBP16.14■□□□□ 0.17
TOM1-210ENST00000449058 KRBA1A5PL33 1030 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 IFNW1P05000 195 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 ADORA3P0DMS8 318 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 PUM1Q14671 1186 aaKnown RBP eCLIP16.13■□□□□ 0.17
TOM1-210ENST00000449058 PTGES3Q15185 160 aaKnown RBP16.13■□□□□ 0.17
TOM1-210ENST00000449058 DUSP7Q16829 419 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 SNX29P2Q8IUI4 249 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 RBM12BQ8IXT5 1001 aaKnown RBP16.13■□□□□ 0.17
TOM1-210ENST00000449058 MCFD2Q8NI22 146 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 OR5P2Q8WZ92 322 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 PELI2Q9HAT8 420 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 ZBTB20Q9HC78 741 aaPredicted RBP16.13■□□□□ 0.17
TOM1-210ENST00000449058 A4GALTQ9NPC4 353 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 IMPAD1Q9NX62 359 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 FTSJ1Q9UET6 329 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 DUSP12Q9UNI6 340 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 TMEM98Q9Y2Y6 226 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 PRKAB1Q9Y478 270 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 SERPINB7O75635 380 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 TGM1P22735 817 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 BSGP35613 385 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 LIMK1P53667 647 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 ST3GAL4Q11206 333 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 GANABQ14697 944 aaKnown RBP16.13■□□□□ 0.17
TOM1-210ENST00000449058 KLHL17Q6TDP4 642 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 CEACAM20Q6UY09 585 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 C17orf64Q86WR6 236 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 HORMAD2Q8N7B1 307 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 ANKRD53Q8N9V6 530 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 AQP11Q8NBQ7 271 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 PLA2G15Q8NCC3 412 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 GTPBP3Q969Y2 492 aaKnown RBP16.13■□□□□ 0.17
TOM1-210ENST00000449058 TM4SF18Q96CE8 201 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 ACAT2Q9BWD1 397 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 MS4A8Q9BY19 250 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 MMP27Q9H306 513 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 TRNAU1APQ9NX07 287 aaKnown RBP16.13■□□□□ 0.17
TOM1-210ENST00000449058 CXXC1Q9P0U4 656 aaPredicted RBP16.13■□□□□ 0.17
TOM1-210ENST00000449058 SLC6A14Q9UN76 642 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 SNX8Q9Y5X2 465 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 CCDC88CQ9P219 2028 aa16.13■□□□□ 0.17
TOM1-210ENST00000449058 METTL15A6NJ78 407 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 ZAR1LA6NP61 321 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 FFAR1O14842 300 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 IMPDH2P12268 514 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 POU2F1P14859 743 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 VIPR2P41587 438 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 FPGSQ05932 587 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 ARHGAP19Q14CB8 494 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 FAM180BQ6P0A1 224 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 ADAMTSL4Q6UY14 1074 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 AMZ2Q86W34 360 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 STX19Q8N4C7 294 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 NATD1Q8N6N6 113 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 PSMA8Q8TAA3 256 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 SLC38A5Q8WUX1 472 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 TFGQ92734 400 aaPredicted RBP16.12■□□□□ 0.17
TOM1-210ENST00000449058 TMEM245Q9H330 911 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 WASH6PQ9NQA3 447 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 SLC23A2Q9UGH3 650 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 CFAP20Q9Y6A4 193 aaKnown RBP16.12■□□□□ 0.17
TOM1-210ENST00000449058 A3GALT2U3KPV4 340 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 MYO7AQ13402 2215 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 ANKDD1BA6NHY2 528 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 M0R129 80 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 PTHP01270 115 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 GASTP01350 101 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 GRK5P34947 590 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 PPP5CP53041 499 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 MAPK12P53778 367 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 CDC42P60953 191 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 CAMK1Q14012 370 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 ZNF404Q494X3 552 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 USP43Q70EL4 1123 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 CRELD1Q96HD1 420 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 F2RL3Q96RI0 385 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 NMNAT1Q9HAN9 279 aaPredicted RBP16.12■□□□□ 0.17
TOM1-210ENST00000449058 MS4A12Q9NXJ0 267 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 TAC3Q9UHF0 121 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 PCDHGA3Q9Y5H0 932 aa16.12■□□□□ 0.17
TOM1-210ENST00000449058 DSPPQ9NZW4 1301 aa16.11■□□□□ 0.17
TOM1-210ENST00000449058 MKI67P46013 3256 aaKnown RBP16.11■□□□□ 0.17
TOM1-210ENST00000449058 SH3D21A4FU49 640 aa16.11■□□□□ 0.17
TOM1-210ENST00000449058 OTOL1A6NHN0 477 aaPredicted RBP16.11■□□□□ 0.17
TOM1-210ENST00000449058 RTCAO00442 366 aaKnown RBP16.11■□□□□ 0.17
TOM1-210ENST00000449058 ZSCAN9O15535 394 aaPredicted RBP16.11■□□□□ 0.17
TOM1-210ENST00000449058 FGBP02675 491 aa16.11■□□□□ 0.17
TOM1-210ENST00000449058 RPLP0P05388 317 aaKnown RBP16.11■□□□□ 0.17
TOM1-210ENST00000449058 ALOX5P09917 674 aa16.11■□□□□ 0.17
TOM1-210ENST00000449058 CHMP24386 653 aa16.11■□□□□ 0.17
TOM1-210ENST00000449058 FRKP42685 505 aaPredicted RBP16.11■□□□□ 0.17
TOM1-210ENST00000449058 CRISP1P54107 249 aa16.11■□□□□ 0.17
TOM1-210ENST00000449058 LIM2P55344 173 aa16.11■□□□□ 0.17
TOM1-210ENST00000449058 RPS26P62854 115 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms