RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 HOXC11O43248 304 aaPredicted RBP13.03□□□□□ -0.32
POLR1B-209ENST00000448770 URODP06132 367 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 KLK1P06870 262 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 CTSLP07711 333 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 SLAMF1Q13291 335 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 RAB33AQ14088 237 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 UAP1L1Q3KQV9 507 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 SYTL3Q4VX76 610 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 MPP7Q5T2T1 576 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 GDPD4Q6W3E5 623 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 VN1R5Q7Z5H4 357 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 TMC8Q8IU68 726 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 C9orf43Q8TAL5 461 aaPredicted RBP13.03□□□□□ -0.32
POLR1B-209ENST00000448770 PPCDCQ96CD2 204 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 METTL2AQ96IZ6 378 aaKnown RBP13.03□□□□□ -0.32
POLR1B-209ENST00000448770 MRPL17Q9NRX2 175 aaKnown RBP13.03□□□□□ -0.32
POLR1B-209ENST00000448770 ITM2BQ9Y287 266 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 DENND4CQ5VZ89 1909 aa13.03□□□□□ -0.32
POLR1B-209ENST00000448770 A0A1W2PRU2 124 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 PIPSLA2A3N6 862 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 LEFTY2O00292 366 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 PLK4O00444 970 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 SLITRK5O94991 958 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 POP4O95707 220 aaKnown RBP13.02□□□□□ -0.32
POLR1B-209ENST00000448770 SCG5P05408 212 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 IL3P08700 152 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 CHRM5P08912 532 aaPredicted RBP13.02□□□□□ -0.32
POLR1B-209ENST00000448770 CLEC2LP0C7M8 214 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 SOX6P35712 828 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 CHI3L1P36222 383 aaPredicted RBP13.02□□□□□ -0.32
POLR1B-209ENST00000448770 GJA8P48165 433 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 EPHB3P54753 998 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 RBBP4Q09028 425 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 TAB1Q15750 504 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 ZNF658BQ4V348 819 aaPredicted RBP13.02□□□□□ -0.32
POLR1B-209ENST00000448770 CEACAM20Q6UY09 585 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 VASH1Q7L8A9 365 aaPredicted RBP13.02□□□□□ -0.32
POLR1B-209ENST00000448770 DEFB128Q7Z7B8 93 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 OXR1Q8N573 874 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 IQCF1Q8N6M8 205 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 HORMAD2Q8N7B1 307 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 PIK3R3Q92569 461 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 TMEM159Q96B96 161 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 HHIPL1Q96JK4 782 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 MAPKAP1Q9BPZ7 522 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 SLC6A16Q9GZN6 736 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 PLSCR3Q9NRY6 295 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 SNTG1Q9NSN8 517 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 TAS2R9Q9NYW1 312 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 TAAR2Q9P1P5 351 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 TRAPPC4Q9Y296 219 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 SNX11Q9Y5W9 270 aa13.02□□□□□ -0.32
POLR1B-209ENST00000448770 SMIM30A4D0T7 59 aa13.02□□□□□ -0.33
POLR1B-209ENST00000448770 PLD2O14939 933 aa13.02□□□□□ -0.33
POLR1B-209ENST00000448770 RGS5O15539 181 aa13.02□□□□□ -0.33
POLR1B-209ENST00000448770 HOXA2O43364 376 aa13.02□□□□□ -0.33
POLR1B-209ENST00000448770 TBX6O95947 436 aaPredicted RBP13.02□□□□□ -0.33
POLR1B-209ENST00000448770 TP53P04637 393 aaPredicted RBP13.02□□□□□ -0.33
POLR1B-209ENST00000448770 PTX3P26022 381 aaPredicted RBP13.02□□□□□ -0.33
POLR1B-209ENST00000448770 TLE2Q04725 743 aa13.02□□□□□ -0.33
POLR1B-209ENST00000448770 TNFAIP8L2Q6P589 184 aaPredicted RBP13.02□□□□□ -0.33
POLR1B-209ENST00000448770 OLIG3Q7RTU3 272 aa13.02□□□□□ -0.33
POLR1B-209ENST00000448770 TCEAL8Q8IYN2 117 aa13.02□□□□□ -0.33
POLR1B-209ENST00000448770 FAM83CQ9BQN1 747 aa13.02□□□□□ -0.33
POLR1B-209ENST00000448770 CCDC32Q9BV29 185 aa13.02□□□□□ -0.33
POLR1B-209ENST00000448770 SRRQ9GZT4 340 aa13.02□□□□□ -0.33
POLR1B-209ENST00000448770 MMP28Q9H239 520 aa13.02□□□□□ -0.33
POLR1B-209ENST00000448770 MIXL1Q9H2W2 232 aa13.02□□□□□ -0.33
POLR1B-209ENST00000448770 TIGARQ9NQ88 270 aa13.02□□□□□ -0.33
POLR1B-209ENST00000448770 ASAH2Q9NR71 780 aa13.02□□□□□ -0.33
POLR1B-209ENST00000448770 YARS2Q9Y2Z4 477 aaKnown RBP13.02□□□□□ -0.33
POLR1B-209ENST00000448770 A0A1W2PQ09 198 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 SH3D21A4FU49 640 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 HEPACAM2A8MVW5 462 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 TLR4O00206 839 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 KPNA5O15131 536 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 LEFTY1O75610 366 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 C1orf105O95561 183 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 CATP04040 527 aaKnown RBP13.01□□□□□ -0.33
POLR1B-209ENST00000448770 CYP17A1P05093 508 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 ITGA2P17301 1181 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 RHCEP18577 417 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 S100A1P23297 94 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 CXCR2P25025 360 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 VIPR1P32241 457 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 PRLHRP49683 370 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 DEFA1P59665 94 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 DEFA3P59666 94 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 MXD1Q05195 221 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 ZNF91Q05481 1191 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 SLC44A2Q8IWA5 706 aaPredicted RBP13.01□□□□□ -0.33
POLR1B-209ENST00000448770 SLC34A3Q8N130 599 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 BTN2A2Q8WVV5 523 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 TMEM169Q96HH4 297 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 CLN6Q9NWW5 311 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 C5AR2Q9P296 337 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 ZNF221Q9UK13 617 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 WBP11Q9Y2W2 641 aaKnown RBP13.01□□□□□ -0.33
POLR1B-209ENST00000448770 A0A0B4J293 547 aa13.01□□□□□ -0.33
POLR1B-209ENST00000448770 A0A1W2PRB8 838 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms