RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 NCF4Q15080 339 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 TRIM69Q86WT6 500 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 TAGAPQ8N103 731 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 OR2A12Q8NGT7 310 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 OR5AK3PQ8NH89 298 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 ZNF480Q8WV37 535 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 SNX18Q96RF0 628 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 BARHL1Q9BZE3 327 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 REV1Q9UBZ9 1251 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 SEC14L4Q9UDX3 406 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 V9GYH0 126 aa18.22■□□□□ 0.51
SDCBP-204ENST00000447182 A0A1W2PRB8 838 aa18.21■□□□□ 0.51
SDCBP-204ENST00000447182 FAM172BPA6NC97 362 aa18.21■□□□□ 0.51
SDCBP-204ENST00000447182 TLR4O00206 839 aa18.21■□□□□ 0.51
SDCBP-204ENST00000447182 FFAR1O14842 300 aa18.21■□□□□ 0.51
SDCBP-204ENST00000447182 GBAP04062 536 aa18.21■□□□□ 0.51
SDCBP-204ENST00000447182 OSMP13725 252 aa18.21■□□□□ 0.51
SDCBP-204ENST00000447182 TBPL1P62380 186 aa18.21■□□□□ 0.51
SDCBP-204ENST00000447182 SLBPQ14493 270 aaKnown RBP eCLIP18.21■□□□□ 0.51
SDCBP-204ENST00000447182 PUM1Q14671 1186 aaKnown RBP eCLIP18.21■□□□□ 0.51
SDCBP-204ENST00000447182 DUSP7Q16829 419 aa18.21■□□□□ 0.51
SDCBP-204ENST00000447182 REEP3Q6NUK4 255 aa18.21■□□□□ 0.51
SDCBP-204ENST00000447182 NRARPQ7Z6K4 114 aa18.21■□□□□ 0.51
SDCBP-204ENST00000447182 OR8H2Q8N162 312 aa18.21■□□□□ 0.51
SDCBP-204ENST00000447182 WDR48Q8TAF3 677 aa18.21■□□□□ 0.51
SDCBP-204ENST00000447182 ASB15Q8WXK1 588 aa18.21■□□□□ 0.51
SDCBP-204ENST00000447182 KLHL6Q8WZ60 621 aa18.21■□□□□ 0.51
SDCBP-204ENST00000447182 CNPPD1Q9BV87 410 aa18.21■□□□□ 0.51
SDCBP-204ENST00000447182 MAFFQ9ULX9 164 aa18.21■□□□□ 0.51
SDCBP-204ENST00000447182 ICKQ9UPZ9 632 aa18.21■□□□□ 0.51
SDCBP-204ENST00000447182 N6AMT1Q9Y5N5 214 aa18.21■□□□□ 0.51
SDCBP-204ENST00000447182 SCN5AQ14524 2016 aa18.21■□□□□ 0.5
SDCBP-204ENST00000447182 URODP06132 367 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 C1GALT1C1LP0DN25 315 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 CRYBB2P43320 205 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 RORCP51449 518 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 TAS2R50P59544 299 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 DSTNP60981 165 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 SPHARQ15513 63 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 ATAD3CQ5T2N8 411 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 ASTLQ6HA08 431 aaPredicted RBP18.2■□□□□ 0.5
SDCBP-204ENST00000447182 IL17RCQ8NAC3 791 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 PDXPQ96GD0 296 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 TMEM80Q96HE8 168 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 UCK2Q9BZX2 261 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 RHCGQ9UBD6 479 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 TRBV4-1A0A0J9YWV2 114 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 PIPSLA2A3N6 862 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 ZNF670-ZNF695F2Z2N8 137 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 LEFTY2O00292 366 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 IDH3BO43837 385 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 C1orf105O95561 183 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 TGFB1P01137 390 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 UQCRC2P22695 453 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 PSMA1P25786 263 aaKnown RBP18.2■□□□□ 0.5
SDCBP-204ENST00000447182 ITGB7P26010 798 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 POU1F1P28069 291 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 LIM2P55344 173 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 PRSS53Q2L4Q9 553 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 IKBIPQ70UQ0 350 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 GLYATL1Q969I3 302 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 SGPP1Q9BX95 441 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 TMEM121BQ9BXQ6 578 aaPredicted RBP18.2■□□□□ 0.5
SDCBP-204ENST00000447182 MGAT4BQ9UQ53 548 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 CCDC88CQ9P219 2028 aa18.2■□□□□ 0.5
SDCBP-204ENST00000447182 CSO75390 466 aaKnown RBP18.19■□□□□ 0.5
SDCBP-204ENST00000447182 PDHA2P29803 388 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 ZNF284Q2VY69 593 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 C12orf73Q69YU5 71 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 HIST2H2AA3Q6FI13 130 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 TMPRSS11AQ6ZMR5 421 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 TMEM169Q96HH4 297 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 IL4I1Q96RQ9 567 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 MND1Q9BWT6 205 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 OR51B5Q9H339 312 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 EXOSC4Q9NPD3 245 aaKnown RBP18.19■□□□□ 0.5
SDCBP-204ENST00000447182 C11orf16Q9NQ32 467 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 NDUFB11Q9NX14 153 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 MUTYHQ9UIF7 546 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 STUB1Q9UNE7 303 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 SH2B3Q9UQQ2 575 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 DYRK1BQ9Y463 629 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 TRAV19A0A0A6YYK7 116 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 IQCMA0A1B0GVH7 501 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 TSPAN11A1L157 253 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 SOAT1P35610 550 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 DDOSTP39656 456 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 SOX3P41225 446 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 RFX2P48378 723 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 PSPHP78330 225 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 TMEM115Q12893 351 aaPredicted RBP18.19■□□□□ 0.5
SDCBP-204ENST00000447182 ZNF658BQ4V348 819 aaPredicted RBP18.19■□□□□ 0.5
SDCBP-204ENST00000447182 NXNL2Q5VZ03 156 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 ZNF517Q6ZMY9 492 aaPredicted RBP18.19■□□□□ 0.5
SDCBP-204ENST00000447182 TECPR1Q7Z6L1 1165 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 GPR151Q8TDV0 419 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 DHRS1Q96LJ7 313 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 TMCC3Q9ULS5 477 aa18.19■□□□□ 0.5
SDCBP-204ENST00000447182 MYOFQ9NZM1 2061 aa18.18■□□□□ 0.5
SDCBP-204ENST00000447182 HYKKA2RU49 373 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms