RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 CARFQ8N187 725 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 ENDOVQ8N8Q3 282 aaKnown RBP7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 CCDC197Q8NCU1 140 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 ADCY4Q8NFM4 1077 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 CEP70Q8NHQ1 597 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 ITFG2Q969R8 447 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 KLHL29Q96CT2 875 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 OTUB1Q96FW1 271 aaPredicted RBP7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 MAELQ96JY0 434 aaKnown RBP7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 CCDC28BQ9BUN5 200 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 DPY30Q9C005 99 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 MYLK2Q9H1R3 596 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 ACTL8Q9H568 366 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 DDX31Q9H8H2 851 aaKnown RBP7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 NECTIN3Q9NQS3 549 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 PNO1Q9NRX1 252 aaKnown RBP7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 NMRK1Q9NWW6 199 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 AHSPQ9NZD4 102 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 NOP53Q9NZM5 478 aaKnown RBP7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 KCMF1Q9P0J7 381 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 ADGRE2Q9UHX3 823 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 MCM8Q9UJA3 840 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 CROTQ9UKG9 612 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 MKL2Q9ULH7 1088 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 PTRH2Q9Y3E5 179 aaKnown RBP7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 GPR45Q9Y5Y3 372 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 KIF26BQ2KJY2 2108 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 ASPMQ8IZT6 3477 aa7.12□□□□□ -1.27
SF3A3P1-201ENST00000446317 TMX2-CTNND1H3BSU7 103 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 TXNDC9O14530 226 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 VPS4BO75351 444 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 SEMA3DO95025 777 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 NSA2O95478 260 aaKnown RBP7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 PRKAR1AP10644 381 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 LAMP1P11279 417 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 PIM1P11309 404 aaPredicted RBP7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 RNH1P13489 461 aaKnown RBP7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 AGXTP21549 392 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 PIK3R1P27986 724 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 SOX11P35716 441 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 DLSTP36957 453 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 GCGRP47871 477 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 PGDP52209 483 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 ARSFP54793 590 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 RAB38P57729 211 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 RAB15P59190 212 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 STX1BP61266 288 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 TNFRSF17Q02223 184 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 RELAQ04206 551 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 FOLH1Q04609 750 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 KLC1Q07866 573 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 ZNF763Q0D2J5 394 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 ABHD18Q0P651 414 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 HSPB3Q12988 150 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 UGT8Q16880 541 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 VPS26BQ4G0F5 336 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 SPANXN4Q5MJ08 99 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 TMEM164Q5U3C3 297 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 ZNF385CQ66K41 422 aaPredicted RBP7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 RHBDD2Q6NTF9 364 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 SLC2A7Q6PXP3 512 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 FAM198BQ6UWH4 519 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 SZRD1Q7Z422 152 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 SPATA19Q7Z5L4 167 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 SNX32Q86XE0 403 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 CACNA2D3Q8IZS8 1091 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 MIER2Q8N344 545 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 IL22RA1Q8N6P7 574 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 SIMC1Q8NDZ2 872 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 FBXO30Q8TB52 745 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 STT3BQ8TCJ2 826 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 KAT2AQ92830 837 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 ERP27Q96DN0 273 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 SLC46A1Q96NT5 459 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 NPAS2Q99743 824 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 INPP5KQ9BT40 448 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 RPF2Q9H7B2 306 aaKnown RBP7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 ASCL3Q9NQ33 180 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 MIEF1Q9NQG6 463 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 SAR1AQ9NR31 198 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 PRTFDC1Q9NRG1 225 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 ARL8BQ9NVJ2 186 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 IL17BQ9UHF5 180 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 UTS2RQ9UKP6 389 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 ACSL6Q9UKU0 697 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 DAPP1Q9UN19 280 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 ARL2BPQ9Y2Y0 163 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 SLC22A7Q9Y694 548 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 FREM2Q5SZK8 3169 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 A0A088AWK7 358 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 SERTM1A2A2V5 107 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 GABRR3A8MPY1 467 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 HRKO00198 91 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 CYR61O00622 381 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 SCAMP2O15127 329 aaKnown RBP7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 CFLARO15519 480 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 PROM1O43490 865 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 TLX3O43711 291 aaPredicted RBP7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 SLC22A3O75751 556 aa7.11□□□□□ -1.27
SF3A3P1-201ENST00000446317 SNUPNO95149 360 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms