RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 PDZK1IP1Q13113 114 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 GPR17Q13304 367 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 PTCH1Q13635 1447 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 RBM39Q14498 530 aaKnown RBP3.57□□□□□ -1.84
LINC01004-201ENST00000445184 CEBPEQ15744 281 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 ZNF528Q3MIS6 628 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 ZC3H13Q5T200 1668 aaKnown RBP3.57□□□□□ -1.84
LINC01004-201ENST00000445184 PDSS1Q5T2R2 415 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 TRIM65Q6PJ69 517 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 FAM159AQ6UWV7 190 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 ISLR2Q6UXK2 745 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 CEACAM20Q6UY09 585 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 ZNF771Q7L3S4 317 aaPredicted RBP3.57□□□□□ -1.84
LINC01004-201ENST00000445184 HSCBQ8IWL3 235 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 KIRREL3Q8IZU9 778 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 GPC2Q8N158 579 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 CIARTQ8N365 385 aaPredicted RBP3.57□□□□□ -1.84
LINC01004-201ENST00000445184 RNF149Q8NC42 400 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 TRPV3Q8NET8 790 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 OR4A16Q8NH70 328 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 HPSE2Q8WWQ2 592 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 ZNF606Q8WXB4 792 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 GLYATL1Q969I3 302 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 RFT1Q96AA3 541 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 ULK4Q96C45 1275 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 RBM18Q96H35 190 aaKnown RBP3.57□□□□□ -1.84
LINC01004-201ENST00000445184 ST6GAL2Q96JF0 529 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 C10orf90Q96M02 699 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 DUX5Q96PT3 197 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 BTBD9Q96Q07 612 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 S1PR3Q99500 378 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 CRACR2AQ9BSW2 395 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 URM1Q9BTM9 101 aaKnown RBP3.57□□□□□ -1.84
LINC01004-201ENST00000445184 SLC35D1Q9NTN3 355 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 EXTL2Q9UBQ6 330 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 PILRAQ9UKJ1 303 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 TNNQ9UQP3 1299 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 RIPK3Q9Y572 518 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 BIVM-ERCC5R4GMW8 1640 aa3.57□□□□□ -1.84
LINC01004-201ENST00000445184 A2MP01023 1474 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 CAMSAP2Q08AD1 1489 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 MLH3Q9UHC1 1453 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 PNPLA6Q8IY17 1366 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 ZNF732B4DXR9 585 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 CHADO15335 359 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 LANCL1O43813 399 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 KIF5CO60282 957 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 KHDRBS3O75525 346 aaKnown RBP3.56□□□□□ -1.84
LINC01004-201ENST00000445184 GRAP2O75791 330 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 DARSP14868 501 aaKnown RBP3.56□□□□□ -1.84
LINC01004-201ENST00000445184 ZNF18P17022 549 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 LHCGRP22888 699 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 EDNRAP25101 427 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 PTPN4P29074 926 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 TNNT2P45379 298 aaPredicted RBP3.56□□□□□ -1.84
LINC01004-201ENST00000445184 FMO5P49326 533 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 TAF6P49848 677 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 CCL11P51671 97 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 ART1P52961 327 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 ARFIP1P53367 373 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 CDH11P55287 796 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 SSTP61278 116 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 TRA2BP62995 288 aaKnown RBP3.56□□□□□ -1.84
LINC01004-201ENST00000445184 PPP1R8Q12972 351 aaKnown RBP3.56□□□□□ -1.84
LINC01004-201ENST00000445184 ABRQ12979 859 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 SCGB2A2Q13296 93 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 GIT2Q14161 759 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 TAF13Q15543 124 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 CCDC40Q4G0X9 1142 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 ZNF542PQ5EBM4 170 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 NKAIN2Q5VXU1 208 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 OR4C11Q6IEV9 310 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 PRSS57Q6UWY2 283 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 C15orf52Q6ZUT6 534 aaKnown RBP3.56□□□□□ -1.84
LINC01004-201ENST00000445184 SLC22A16Q86VW1 577 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 ZNF444Q8N0Y2 327 aaPredicted RBP3.56□□□□□ -1.84
LINC01004-201ENST00000445184 ZNF383Q8NA42 475 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 TRIM58Q8NG06 486 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 UBTD2Q8WUN7 234 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 SEPT8Q92599 483 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 DTNBP1Q96EV8 351 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 C16orf58Q96GQ5 468 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 SENP5Q96HI0 755 aaPredicted RBP3.56□□□□□ -1.84
LINC01004-201ENST00000445184 COQ7Q99807 217 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 TRMT61BQ9BVS5 477 aaKnown RBP3.56□□□□□ -1.84
LINC01004-201ENST00000445184 NMNAT2Q9BZQ4 307 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 NT5C3AQ9H0P0 336 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 DDX47Q9H0S4 455 aaKnown RBP3.56□□□□□ -1.84
LINC01004-201ENST00000445184 CHMP4BQ9H444 224 aaKnown RBP3.56□□□□□ -1.84
LINC01004-201ENST00000445184 TBC1D13Q9NVG8 400 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 PTTG2Q9NZH5 202 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 ERVK-19Q9WJR5 959 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 AP1M2Q9Y6Q5 423 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 R4GN57 208 aa3.56□□□□□ -1.84
LINC01004-201ENST00000445184 KDM5AP29375 1690 aaKnown RBP3.55□□□□□ -1.84
LINC01004-201ENST00000445184 TNRC18O15417 2968 aaPredicted RBP3.55□□□□□ -1.84
LINC01004-201ENST00000445184 TMEM89A2RUT3 159 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 E5RGE8 158 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 CHUKO15111 745 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 ARPC1BO15143 372 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms